Hydrogenophaga sp. PAMC20947: E5678_03935
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Entry
E5678_03935 CDS
T05960
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyc03009
]
E5678_03935
Enzymes [BR:
hyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
E5678_03935
Ribosome biogenesis [BR:
hyc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E5678_03935
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TP_0666
Motif
Other DBs
NCBI-ProteinID:
QCB45250
LinkDB
All DBs
Position
863552..864853
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AA seq
433 aa
AA seq
DB search
MTPVPKKTPKPDPSSPGAVEDPSVAGASEAPAEDSVPSHAGTDALRFDDVISGAFDAVQE
QEIPLPTKRVLEPQPESPKLHKVLAQAGMGSRLEMEKMILEGRISVNGEPAHVGQRIQYN
DVIKVNGKQVRVRMTPPPPRVLAYHKPAGEVVSHDDPQNRPTVFRRLPKLYQGKWQSVGR
LDLNTEGLLLLTSSGELANRLMHPRFGLQREYAVRVLGALSNEEKQRLLDGVRLDDGMAQ
FASIEAGGGEGANCWYRVTIGEGRNREVRRMFEAVGHAVSRLIRIRYGAMMLPRGLKRGV
WVELDELDIAKLTAAAGMEVIEEPAPRGRRPVGRGNEATGGRNFGHTPSSRGDAPTGIRR
SSMFAPQPKPEGGGDKSGKGRSRQGGQPDPLKTSQGYIGQDALQRSREQDAMRGKSGTGR
RKPSGGGGRKGGR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacaccggtgcccaagaaaacccccaagcctgacccctcttccccgggtgctgtcgag
gacccctctgttgcaggggcttccgaagcccctgctgaggactccgtgccctcccatgca
ggaaccgatgcgctgcgttttgatgacgtgatcagcggcgcatttgatgcggtgcaagag
caggaaattcctttgcccaccaagcgggtgttggagccgcaacccgagtcgcccaagctg
cacaaagtgctggcccaggcaggcatgggttcgcgtcttgaaatggagaaaatgatcctg
gaaggtcgcatctcggtgaacggagagcccgcccatgtggggcagcgcatccagtacaac
gacgtgatcaaggtcaatggcaagcaggtgcgcgttcgcatgacgccgccgccgccgcgc
gtcctcgcgtaccacaagcctgcaggcgaggtggtctctcacgacgatccacaaaaccgg
cccacggtgtttcggcgattgcccaagctctaccagggcaagtggcaatcggtcggccgc
ctggatctgaataccgaaggcttgctgctgctgaccagttcaggtgagctggccaaccgt
ctgatgcacccgcgttttggtttgcagcgcgagtatgcggttcgggtgttgggcgctttg
tccaatgaagaaaagcagcggttgctggacggggttcgtctggacgatggcatggcgcaa
tttgcgagcatcgaagccggtggcggtgaaggcgccaactgctggtaccgcgtgaccatc
ggcgagggacgcaaccgcgaagtgcggcgcatgttcgaggccgtgggccacgccgtcagc
cgattgatccgtatccgctatggcgccatgatgctgccacgtggactgaagcgcggtgtg
tgggttgagctggatgagctcgacatcgccaaattgactgcagcggccggtatggaggtc
attgaagagcccgctccgcgaggacgtcgccctgtggggcgcggcaatgaggccaccggc
gggcgcaattttggccatacacccagcagtcgaggtgatgcgccgaccggcatccgccgc
agcagcatgtttgcgccccagcccaagcccgaaggcggtggcgacaagtccggcaaaggt
cgatccaggcagggtgggcaacccgatccgttgaagacgtcgcaaggctatattggtcag
gacgctctgcaacgcagccgtgagcaagacgccatgcggggcaagagcggcacgggtcgt
cgcaaacccagtggtggcggtggccgaaagggtggccgctga
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