Hydrogenophaga sp. PAMC20947: E5678_04345
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Entry
E5678_04345 CDS
T05960
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00541
Biosynthesis of various nucleotide sugars
hyc01100
Metabolic pathways
hyc01250
Biosynthesis of nucleotide sugars
Module
hyc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E5678_04345 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hyc01005
]
E5678_04345 (kdsB)
Enzymes [BR:
hyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
E5678_04345 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hyc01005
]
Lipid A
E5678_04345 (kdsB)
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Paralog
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QCB45322
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Position
complement(952133..952915)
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AA seq
260 aa
AA seq
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MSTGSPHAQNFTVLIPARMASSRLPDKPLADIGGLPMVVRVARQAQLSGADSCVVAADDP
RIIAACETHGVRAILTRTDHASGSDRLAEACQLLGLNDDTVVVNVQGDEPLIDPELIQAV
ANELHQRPDCVMSTAAHALDSVADFLNPNVVKLVTDRNRTALYFSRAPMPWWRDGMRPGE
LPTALTNPAPLRHIGVYGYRAAFLRSFPSLEPAPMERTEALEQLRVLWHGQRIAVHMAAG
APAGGVDTPEDLARVRARFP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggggagcccccacgctcagaacttcaccgttttgattccggcgcgcatggct
tccagccggcttccggacaaaccgctggccgacattggtggcctgcccatggtggttcgc
gtggcccggcaggcacagctgagtggtgcagacagctgtgtcgtcgccgcagacgaccca
cgcatcatcgcggcctgcgaaacccacggcgtgcgggccatcctcacccgcaccgaccat
gcctcgggcagcgaccgcttggccgaggcctgccagttgctgggtctgaacgacgacacc
gtggtggtcaacgtgcaaggtgacgagcctttgatcgaccctgagctgatccaggcggtg
gcaaacgaactgcaccaacgccccgattgcgtcatgagcaccgcagcccacgccctggac
agcgtggcagatttcctcaaccccaacgtggtcaagctggtgaccgaccgcaaccggact
gccttgtatttcagccgtgcgcccatgccctggtggcgcgacggcatgcgtcccggggag
cttcccaccgcgttgaccaaccccgctccactgcgccacatcggggtttatggctaccgt
gccgccttcttgcgcagttttcccagtctcgagcccgcccccatggagcggaccgaagcc
ctggagcaactgcgcgttttgtggcatggccaacgcatcgccgttcatatggcggccggg
gcccctgcggggggcgttgatacccccgaggatctggcccgggtacgcgcccggttccca
tag
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