Hydrogenophaga sp. PAMC20947: E5678_04410
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Entry
E5678_04410 CDS
T05960
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_04410
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
E5678_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
AAA_16
AAA_30
T2SSE
AAA
AAA_28
SLFN-g3_helicase
nSTAND3
AAA_7
CbiA
AAA_19
AAA_25
AAA_18
AAA_6
Motif
Other DBs
NCBI-ProteinID:
QCB45334
UniProt:
A0A4P7R7B5
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Position
complement(966001..967545)
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AA seq
514 aa
AA seq
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MAEPMLIAQNAQTQCHLMPGLANRHGLITGATGTGKTVTLQALAEQFSNLGVPVFMADVK
GDLTGISQKGAFGEKIAGILKDRGIALPDPMACPTTLWDVFGEQGHPVRATVSDMGPLLL
SRMLDLNDTQSGVLNLVFKIADDNGLLLLDMKDLRAILQHTGDNAKQFTTEYGNISAASI
GAIQRGLMQIEQQGGDQFFGEPMLNISDFMQTVGGKGVINILTADKLMNAPRLYATFLLW
MLSELFEMLPEIGDPDKPKLVFFFDEAHLLFNDAPKVLIERIELVVRLVRSKGVGVYFVT
QNPLDVPDSVLGQLGNRVQHALRAFTPRDQKAVKATAETMRPKAGLDIEAAITELAVGEA
LISFLDAKGRPSETERVFVLPPGSQLGPITAAQRQTLLKESLVAGVYEKTIDRESAYEIF
NTRTEANLAQAEAEARDAPKTPRIPGAAKQEEAKDSGGFGSMVNEALFGRTGPRGGQYDG
LVQTMAKTAARSVASGLGRQLVRGILGGLLGGKR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgatgctcatcgcccagaacgctcagacccaatgccacctgatgccaggc
ctggccaaccggcacggtctgatcaccggagccaccggcactggcaagactgtgacgctg
caagcgctggccgagcagttctccaacctgggcgttcctgtgttcatggcggacgtcaaa
ggtgatttgaccggcatcagccagaagggcgcctttggcgagaagatcgcgggcattttg
aaagaccgtggcatcgccctgcccgatccgatggcttgccccaccaccttgtgggatgtg
tttggagaacaagggcacccggtgcgcgccaccgtgagcgacatgggacccttgttgctg
tcgcgcatgcttgatttgaacgacacccagtcgggcgtgctcaacctggtcttcaagatt
gcggacgacaacggattgctgctgctggatatgaaagaccttcgggccatcttgcaacac
accggcgacaacgcgaaacaattcaccacggaatacggcaacatcagtgcggccagcatc
ggcgccatccagcgcggcctgatgcagatcgaacagcaagggggcgatcagttcttcggc
gagcccatgctcaacatcagcgatttcatgcagaccgtgggtggcaaaggggtgatcaac
atcctcaccgccgacaagctgatgaacgcgccccgcctctacgccacgtttttgctgtgg
atgctgtccgagctgtttgaaatgctgcccgagatcggcgatccggacaagcccaagctg
gtgttcttcttcgacgaggcccacctgttgttcaacgacgcacccaaggtcctgatcgag
cgcattgagctggtcgtccgcttggtgcgctccaagggcgtgggcgtttatttcgtgacg
caaaaccccctggatgtgcctgacagtgtgctggggcagctcggcaatcgggtgcagcat
gccctgcgcgcttttacaccgcgggaccagaaagcggtcaaagccacggcggaaacgatg
cgccccaaggcgggactggatatcgaagccgccatcaccgagctggccgtgggtgaggcc
ctgatcagcttccttgatgccaaagggcgccccagcgaaacagagcgggtgtttgtgctg
ccccccggcagccagctcggccctatcacggcagcgcagcgccaaaccttgctcaaggag
tcgctggtggcgggcgtctacgaaaagaccattgaccgcgagagtgcttacgaaattttt
aacacccgcaccgaagccaacctggcccaggcagaggccgaagcccgtgatgcgcctaaa
acgccccgcatcccaggcgccgccaagcaggaagaagccaaagacagcggtggtttcggt
agcatggtgaacgaggcgttgttcggccggaccggccccaggggtggtcagtacgatggg
ttggtgcagaccatggccaagacagcggcacgcagcgtcgccagcggtctgggtcgtcag
ttggttcgggggattttgggtggtttgctcggtgggaagcgataa
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