Hydrogenophaga sp. PAMC20947: E5678_04450
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Entry
E5678_04450 CDS
T05960
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyc03019
]
E5678_04450
03009 Ribosome biogenesis [BR:
hyc03009
]
E5678_04450
Messenger RNA biogenesis [BR:
hyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E5678_04450
Ribosome biogenesis [BR:
hyc03009
]
Prokaryotic type
rRNA processing factors
E5678_04450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QCB45342
LinkDB
All DBs
Position
973379..974938
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AA seq
519 aa
AA seq
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MSQDILINWAPQETRVAVVEQGAVQEVHFERTLERGLVGNIYLGKISRVLPGMQSAFIDI
GLDRAAFLHVADLMPNIVAKHATPRDRTPATASAEGGAGVAGEVQANPRVLTPDPVLPIE
RQIFEGQALMVQVLKDPIGSKGARLTAQISIAGRLLVYLPQDNHVGVSQKIPPAQRESLR
QRVLGLAQGKDGVSAGGFILRTNAEDATDAELGEDIAYLRKTWHRIKDAAARQPSATVLH
EDLNLIQRVLRDLVSSETQSIRIDSREQFGLLQGFAVEFMPDTEAKLQLYTGERPIFDLF
SIDEDIARALSRRVDLKSGGYLVIDQTEALTTVDVNTGGYVGARNFDDTVFRTNLEAAQT
IARQLRLRNLGGIVIVDFIDMVREDHRDAVMGEFRKQLSRDRVKTMIGGFSQLGLVEMTR
KRTRESLAQMLSEPCGACKGKGIVKTARSVCYDVLREILREARAFNPREFRVVAAPQVIE
LFLDEERQHLAGLSDFIGKPISLQSEGSMTQEQYDIVLL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggatattttgatcaactgggccccgcaggagacgcgtgtcgctgttgtcgag
cagggcgcggtgcaggaggtgcatttcgaacgcacgcttgagcgtggtctcgtgggcaac
atctacttgggcaaaatctcccgggtgttgccaggcatgcagtccgctttcatcgacatt
ggcctggatcgtgcggcttttttgcatgtcgccgatctcatgcccaacatcgtggccaaa
cacgctacgccgcgcgatcgcacgcccgcaacagcatcggctgagggcggtgcaggggtt
gcgggcgaggtgcaggccaaccctcgggtgctcacgcccgatccggtattgccaatcgag
cgtcagatttttgagggccaggccctgatggtacaagtgctgaaggacccaatcggctcc
aaaggtgcgcgcctgacggcccagatcagcattgccgggcgtttgctggtgtaccttccg
caagacaatcatgttggcgtgtcccagaagattccgcctgctcagcgtgagtccctgcgg
cagcgggtgctgggtctggcgcagggcaaggatggggtgtctgcgggtgggttcattttg
cgcaccaatgccgaagacgccaccgacgcagaacttggcgaagacatcgcgtatttgcgc
aagacctggcaccgcatcaaggatgcggccgcccggcagccttcagccactgtgttgcat
gaagatctcaacctcattcagcgcgtgttgcgcgatctggtcagcagcgaaactcagtcc
atccgaatcgattcgcgcgagcagtttggcttgttgcagggctttgcggtggagttcatg
cctgacacagaggccaagttgcagctctacaccggcgagcgcccgatttttgacctgttc
agcattgacgaagacatcgccagagccttgagccgccgggtggatctcaagtcgggcggt
tatctggtgatcgaccagaccgaggccttgaccacggtggatgtgaacacgggtggttat
gtgggcgcgcgtaactttgacgacacggtgtttcgaaccaacctggaagccgcacagacg
attgcccgccaattgcgtttgcgcaacctcgggggcatcgtgatcgtggactttattgac
atggtgcgtgaagaccaccgggacgcggtcatgggcgagttccgcaagcaactgtcacgt
gatcgggtcaagaccatgattggcggcttctcgcagctgggattggtggagatgacgcgc
aagcgcacccgcgaatcactggcgcagatgctgagcgagccttgtggtgcctgcaaggga
aaaggcattgtcaaaacggcacgaagcgtttgttacgacgtgctgcgggaaatccttcgc
gaagccagggccttcaacccacgggagtttcgtgtggtcgccgcaccccaggtgattgaa
ctgtttctcgatgaagagcggcagcacctggccggcctgtcggatttcatcggtaagccc
atttcactgcagagtgaaggctccatgacacaggaacagtacgacatcgtgctgctctga
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