KEGG   Hydrogenophaga sp. PAMC20947: E5678_05390
Entry
E5678_05390       CDS       T05960                                 
Name
(GenBank) hypothetical protein
  KO
K03203  type IV secretion system protein VirB8
Organism
hyc  Hydrogenophaga sp. PAMC20947
Pathway
hyc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hyc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E5678_05390
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hyc02044]
    E5678_05390
Secretion system [BR:hyc02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   E5678_05390
SSDB
Motif
Pfam: VirB8 Qn_am_d_aIV
Other DBs
NCBI-ProteinID: QCB45506
LinkDB
Position
1197791..1198681
AA seq 296 aa
MAVFKRGLTEATQEVLKKSMDFESNVVSMVKRSERRAWIVAMSSMFVTVCLVGSIAYMLP
LKEKVPYLVTVDLKRSTSTVSYLRDDVAASGIYASEALNRSYVSRFVQAREGYDWDTINE
HDWEYVSSMSNDAVRGLFVSQFDGTANSPERKWGRENAIRIKVNSIVFNGLDEERGARPT
GATVRFEQWKFDKRTGKSEYLSSHVATLRYEFKSNLKMSEALRMRNPLGFQVTAFKVDDE
FNAPVFKATQQDVGIPLLNEEAGIQFRGADAGTSAETAQPAANTLPGAPATPRQGP
NT seq 891 nt   +upstreamnt  +downstreamnt
atggcagtgttcaagcgtggtttgactgaagcgactcaagaagtcttgaagaagtccatg
gattttgagtcgaacgtcgtgtcgatggtcaagcgcagtgagcgcagggcctggattgtg
gcgatgagctcaatgtttgtgacggtatgtctggtgggctccatcgcatacatgctgcct
ctcaaggaaaaggttccctatctggtcacggttgacctgaagcgcagcaccagcaccgtg
agctatttgcgtgacgatgtcgccgcttcgggcatttacgccagtgaagccctcaacaga
agctatgtctcccgttttgtccaggcgcgcgaaggatatgactgggacacgatcaacgaa
catgactgggaatacgtttcctccatgtcgaacgatgcggttcgcgggttgtttgtgagc
cagtttgatggcacggcaaacagtcccgaaaggaaatggggacgagagaacgccatccga
atcaaggtcaacagcattgtattcaacgggctcgacgaagagcgaggggcgcgtccaacg
ggtgccacagtccggtttgagcagtggaaattcgacaaacgcacaggcaagagcgagtac
ctcagtagccacgtggcgacgttgcggtacgagttcaagtccaacctcaagatgagtgaa
gcccttcgaatgcgcaacccgttggggtttcaggtcaccgctttcaaagtggacgacgag
ttcaacgcaccggtgttcaaagcgacacagcaggatgtgggcatacctctgctgaacgag
gaggcgggcattcagttccgcggggccgacgccggcacctctgccgaaacggcacagcca
gccgccaataccttgcccggcgcaccggccacgccgcgtcaagggccgtga

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