KEGG   Hydrogenophaga sp. PAMC20947: E5678_06300
Entry
E5678_06300       CDS       T05960                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
hyc  Hydrogenophaga sp. PAMC20947
Pathway
hyc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hyc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E5678_06300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hyc02044]
    E5678_06300
Enzymes [BR:hyc01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     E5678_06300
Secretion system [BR:hyc02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   E5678_06300
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 NPHP3_N AAA_16 Septin AAA_7 AAA_29 RsgA_GTPase ABC_tran TrwB_AAD_bind AAA_24
Other DBs
NCBI-ProteinID: QCB48608
UniProt: A0A4P7RF07
LinkDB
Position
complement(1413577..1416039)
AA seq 820 aa
MSPDASFSNFIPFSTHVDTHVVKTREGDYIITWLLSGFPFVGREDWELEHRHKTFNNLLQ
SLRAPDFENVAFWAHDIRRRRPIRVEAQYPHRFSQALHDKYIERLSSKQLMQNELYLSMI
YRPVVSGRKFAAISRDIEILRREEKSYLEKIYELVGNVEALLQDYSPYKLGLYESVHQQV
FSENLEFFGYLVNHLDEPVPVLKAPIYNYLPTSRHMFSPGSGDFAIQTSNGDNHYGAILN
IKEYADSSWPGILNGLKYLEFEYIVTHSFTPMSRYDSMKALERTKGAMLSSEDKAVSQIV
ELDFAMDQLASGNFVLGQYHFNMAVFASDQEQLYANVAQARAQLSGASFVTVKEDVAIAA
AFYAQLPCNWRFRPRIANLSSLNFLGLCPLHNFATGKPNFNPWGPSVSILQTLNNQAYHF
NFHATKPHEYSLGEKAIANTMVIGKSGTGKTALINFLLAQVQKLNPEPTIFFFDKDRGAE
IFIRACGGHYFTLEKGQPTGFNPLQCENTPDNEQFLVELLQTLCGKEKYSAPEMDDLIRA
VRAILDTPVHLRTMTNLRKSLPNMGDNSLYECLSVWCQGGPSAWVFDNPKDNIDFGGSNI
IGFDYTEVIEDSKTREPIIQYLLHRMEDLIDGRPFIYVMDEFWKVLEGKGGLKDFAKNKQ
KTIRKQNGLGIFATQSPQDALNSDISAALIEQTATLILLPNPNADPKDYLEGLKLTRAEF
ELVVGLDERSRCFLVKQGHNAVLCQLNLNGMDDELAVLSGSSDNVEILTDLLAGHPTPHL
PDTWLPEFHARRKGLRGQRNFSVANSHEYLRHAETANDGD
NT seq 2463 nt   +upstreamnt  +downstreamnt
ttgtctccagacgcgtcctttagcaactttattcccttcagcacccacgtcgacacgcat
gtggtcaaaacccgcgagggtgactacatcatcacgtggctgttgagcggatttcctttc
gtggggcgcgaagactgggaactggaacatcgacacaagacattcaacaatctgttgcag
agtttgcgcgcgcccgatttcgaaaacgtggcgttttgggcgcatgacattcggcggcgg
aggccaatacgggtggaagcgcaatacccgcaccgattcagccaggcgttgcatgacaaa
tacattgagcggttgtcgtccaagcagctcatgcaaaacgagctctacctgagcatgatt
tatcgcccggtggtgagtggaaggaagtttgcggcgatttcgagggacatcgaaatattg
cgccgagaagaaaaatcgtatctcgaaaaaatctacgaattggtcggcaacgttgaggct
ttgctgcaggactattcaccatacaagctgggtttgtacgaaagtgtgcaccagcaggta
ttttcggaaaacctggaatttttcggttaccttgtgaaccatcttgatgagccggttcct
gtgttgaaggcgcctatttacaactatttgccaaccagtcggcacatgttttctcccggg
agtggcgatttcgcgattcagaccagcaacggtgacaaccactacggcgcgattctgaat
atcaaggaatatgccgacagcagctggccgggcatcctcaatgggctcaagtaccttgag
tttgagtacatcgtcacgcattcttttacgcccatgagccgctacgactcgatgaaggcc
ttggagcgcaccaagggtgccatgttgtcttccgaggacaaggctgtaagccagattgtg
gagctcgatttcgcgatggaccagctggcttcgggcaattttgtgcttggtcagtatcac
ttcaacatggcggtatttgcctccgaccaagagcaactgtatgcgaacgtcgcacaggcc
cgggcccagttgtcgggcgcgagttttgtgacggtcaaagaggatgtggcgattgctgcg
gctttttacgcgcagctgccttgtaactggcgctttcgcccacgcattgccaatctcagc
tcactcaatttcctgggtctttgccctctgcacaactttgccactgggaaacccaatttc
aacccctggggcccgtcggtcagcatcctgcaaacgctcaacaatcaggcttaccacttc
aatttccacgcgaccaagccccacgagtattcattgggtgaaaaggcgatcgcgaacacg
atggtgatcggtaaatcgggtacgggtaaaacggcactcatcaatttcctgctggcacag
gtgcagaagctgaaccctgagcccaccatcttttttttcgataaggaccggggcgctgag
atcttcattcgggcttgtggcggtcactacttcactctggaaaagggccaacccacgggt
ttcaaccctttgcagtgtgagaacacgcctgacaacgagcaattcctggtcgaactgctg
cagactttgtgcggcaaggagaagtacagcgcgcccgaaatggacgacctgatccgtgcc
gtgcgggccatactggacactccggtgcatctgcgcaccatgaccaacttgcgcaaaagc
ttgcccaacatgggcgacaacagcctgtacgagtgcttgtcggtgtggtgccagggcggg
ccctcggcctgggtttttgacaaccccaaggacaacatcgatttcggtggatccaacatc
atcgggtttgactacaccgaggtgattgaagacagcaagacgcgagagcccatcattcag
tacctgctccaccgcatggaggacctcatcgatggccggccgttcatttacgtgatggat
gagttctggaaagtactcgaaggcaaggggggcctgaaagactttgccaagaacaaacag
aaaaccatccggaaacaaaacggtctgggtatttttgcgacgcaaagcccgcaagatgcg
ctcaacagtgatatttccgcagccttgatcgagcagaccgccacgctgattctgctgccc
aaccccaatgcggatcccaaggattacctggagggcctgaagctcacccgcgccgagttt
gagctcgtggttggcctggacgagcgcagccggtgcttcctggtgaagcagggccacaac
gccgtgttgtgccagctcaacctcaatggcatggacgacgagctggcggtgttgtcgggt
tcgagtgacaacgtcgagatactgaccgatttgctggccgggcatccgacgccccatctg
cccgatacctggttgcccgaattccatgcgcgccgcaaaggtctgcgtggtcaacgcaat
ttcagtgtggccaacagccatgagtacctgcgacacgcggaaacggcgaacgacggtgat
tga

DBGET integrated database retrieval system