Hydrogenophaga sp. PAMC20947: E5678_06470
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Entry
E5678_06470 CDS
T05960
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5678_06470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3_3
HYDIN_VesB_CFA65-like_Ig
TIG
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
QCB45696
UniProt:
A0A4P7R7D3
LinkDB
All DBs
Position
complement(1452087..1458158)
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AA seq
2023 aa
AA seq
DB search
MKIQSNTARSGFFGQSARHCLLAAACFFLTAVVHAAPLAVTVLGVQADGTTVNLGSDYRW
TVEQDATKLSVPGQPATTANYSFSFHTSYMPVVAAGRVGTAPTGLTQDPDVARLYAQPLP
SVCVGTPASNCLDTAKRYYLSVAVEGYQMGGAPIVINGSTATATVYVNQYPVPTAQISVY
AFNDNNPLNSAPDLPQEQGLEGFTVLLMEAGGTFGQSGGAVTQDGFGNPLGTTYNTDGSV
KVRGSGILKTGPDGTLLIQNLFPAKYTVFMVAPVGSDWTQTSTIEGTKGSDAWVKNNEPS
FFQEFGPPGHHVFMGFTKSGCVQGTAGSRCVGLVGPNARNITGKVVNIHNSRTPNYAFER
GAPVNECWVGLNETGASTRTLYTTACKKDSTFTIPNVPPGNYELVVWDEPLDMIIGTQTI
TVGGSDLAMGDVPVFSWFGRIQGRVFQDIDGSGLPFFAEAYSKPYIKVDPVTGIETEEQK
NYAPGDLKPAFGEGIASTIRFRDGSIYQAAVTKKDGTYAFTEVFPFFNWMVTEIDYARFK
VTGATMVTDAGGAIAPDENAIKLWNAETGSYGSSDPAFAYNPWIRLNPQLQETCTPEQVA
LNKDADGKIIDTTACFKAGDKYYRTEQGVTLLEGTQAFLGLTNHIEWGKQPYAGELNGTK
SENGGIAGIVQYAITRAEDDPRFAAAENWEPGVPRVQVNMFLDCDADGLIDKPKNDGTGL
CAAGGLSGADGHIAQLPDVDNYPFCWRDPESCTLTVSTKGPEDYERTGNDGVFSFGDVFS
WGGPQANDPTSQLHVGIGGTDSWDDNVPTGCIKPPPGPVANGSIPFVAPADLDCFDGLFN
FNQVRPSLFDGGYAFGRVAGQAELPVLIGSAGKGTYIVEAVAPPGYLHVGSGDQNVAFGD
TLKASTAALPFECVGMELPVPAKLTLFPGEDNPAYGGAGQTWRKCDMKAVPLVPGTNPAP
NFFLYTEAPVAGHGVGFILDDTATEFNRFSPSFGEKYAPPHLPVSVQDWTGREITRVYSD
QFGSYNFLTPSSFTINPPYPSGVMPSMMVSCMNHPGPIMDTQAFLSDGTTANPNFGKMVI
DPFFNRKYTQFCYTLQYLAGKTTYLDTPVLPIAAFASVDKNPLDCECQDGTPVIYSANNA
NPAVNNGNNGPWVPNGGNSSARTLTIVSAGQVDVPNPAYDPALPGSPKNIVRDYGFGTSQ
GTIKLGNTTLTATTWSNDLIVVTVPNNAGTGQLIITRGDNGKSSVVGLTVHVGGLKPIVV
QPGESIQAVIDAPTTPAGALISIPPGTYNEYVVADKRVRLQGWGANSVAINASKASAGGL
AAWRTLMAKKVDARCSLANGNAGAVPNFVTYPGTGCPAGTPVNVDTGGPTLVVGPNRTFD
LLPGQALGMNKANNEPILFSAEEGPGILAVGRAGNNQGTTCQNAGVAFRIDGLTVTGSDS
GGGILASGYNCNLQITNNRVVGNYGTYGGGVRVGHTALESDTVYTSGVNTGVVVAYNWIS
QNGASEIANGDGGGGGVTMGTGSNNYLVSENYICGNFSMSDGGGISHVGFSAGSNQILNN
KILLNQTFNQATDPTGGGLFIGGQITLPGGTDEGTGDLTVDRNLIQYNHAGAGAGGGVSI
VRTRNGNGNNADNVLLTNNMIVNNATAYAGGGVAVADVGSNVRLVNNTVAGNTSTATNRQ
SFPPTGQKVQSTAQVAGIARVSGGNNSSPTLLNNIVHGNHAYTWSITPANPGPNDVQTTV
LTDAGVWDLGVVGNTSKTALASSNSVLTIGAGNSSANGGIQASDSQVAFVRPISLLSQTD
PDQPVILPETTIMQTALTFDEGGNFINVIFSPLTPWDLDDPAALRADYHLQSGSVAVNAG
ANRNGNNGVPTNDYDGDDRLRTNIDVGADEFGAGGGSGGGQPAVSITGASGAATLTGSTL
DFGTRSNSNFYSMVTLTVGGTAPATFGAVAVSNTNFAALLGNSFGTRTPTAVDTCSGQTV
AVGNTCQIEVRFAGGFTNASKTGSLSISYNGASSPVTLSLTGQ
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccagagcaacaccgcaagatccggattcttcgggcagtcagccaggcattgc
ttgctggccgctgcctgttttttcctcacggctgtcgtgcacgctgctccgctggcggtc
acggttctgggggtgcaggccgacggcaccacggtgaacctcggcagcgactaccgctgg
accgttgagcaagacgccaccaagctctcggtgccggggcagccggccaccacggccaat
tactcgttcagcttccacaccagttacatgccggtggtcgcggccgggcgggtgggcacc
gcgcccacaggcctgacgcaagaccccgatgtggcacggttgtatgcgcaaccgttgccc
tcggtctgcgtgggcaccccggcctccaattgtctggatacggccaagcgctactacctc
tccgtcgccgtcgaaggctaccagatgggcggggcgcccattgtgatcaatggcagcaca
gccaccgccacggtgtatgtcaaccaataccccgtgccaacggcgcagatttcggtgtac
gcgttcaacgacaacaaccccctcaacagtgcacccgacctgccgcaggagcaggggctt
gaaggtttcaccgtgctgctcatggaggccggcggcaccttcggccagtccggcggcgcg
gtgacgcaagacggtttcggcaacccgctgggcacaacctacaacaccgacggttccgtc
aaggtgcgcggctccggcattctcaaaaccggccctgatggcacgctgctcatccagaac
ctgttcccggccaaatacaccgtgttcatggtggcgcccgtcggcagcgactggacccag
acctccaccatcgaaggcaccaagggctctgacgcctgggtgaaaaacaacgagccttct
ttcttccaggaattcggcccccccggccaccatgtgttcatgggtttcaccaagtcgggt
tgtgtccaggggacggcgggcagccggtgtgtgggtttggtgggacccaacgcacgcaac
atcaccggcaaggtggtcaacatccacaactcgcgcacgcccaattacgcctttgaaaga
ggtgcgcctgtgaacgaatgctgggtggggctgaacgaaaccggcgccagtaccaggacc
ctctatacgaccgcctgcaagaaggacagcaccttcaccatcccgaacgtgcctccaggc
aactatgagctggtggtgtgggacgagccgctggacatgatcatcggcacacaaaccatc
acggtcggaggctccgacctcgccatgggcgatgtgccggtgttcagctggttcggccgg
atccagggccgtgtgttccaggacatcgatggcagcggcctgccgttctttgccgaggcc
tacagcaagccttacatcaaggtcgatccggtgaccggtatcgagaccgaagaacagaaa
aactacgcccccggcgatctcaagcccgcttttggtgaaggcattgccagcaccatccgc
ttccgcgatggcagcatttaccaggctgcggtgaccaagaaagatggcacctacgccttc
acagaggtgttcccgttcttcaactggatggtgaccgagatcgactacgcacggttcaaa
gtgaccggtgccaccatggtgaccgatgccggtggtgcgatcgcccccgatgaaaatgcg
atcaaactgtggaacgccgagacgggcagctatggcagcagcgatccggcttttgcctac
aacccctggatccgtttgaacccgcagctgcaggaaacctgtacccctgagcaggtggcg
ttgaacaaagacgccgacggcaagatcatcgacaccacggcctgcttcaaggcgggcgac
aagtactaccgcaccgagcagggcgtgaccttgctggaaggcacccaagccttcctgggc
ctgaccaaccacatcgaatggggcaagcaaccctacgccggtgagctcaatggcaccaag
agtgaaaacggtggcatcgccggcatcgttcaatacgccatcacgcgggccgaagacgat
ccccgttttgccgcggctgaaaactgggagcccggtgtgccgcgcgtgcaggtcaacatg
ttcctggactgcgatgccgacggcctgattgacaagccgaagaacgatggcacaggcctg
tgcgccgcgggcggcctgagtggcgcagacggccacatcgcccaattgcccgatgtggac
aactaccccttctgctggcgcgacccggagtcctgtacgctgaccgtctcgaccaagggc
ccagaggactacgagcgcaccgggaacgatggcgtgttcagcttcggtgacgtgttcagc
tggggtggcccacaagccaatgacccaaccagtcaactgcacgtgggtatcggcggcacc
gacagctgggacgacaacgtgcccacaggctgtatcaagccaccgcccggcccggtggcc
aatggttcgatccccttcgtcgcgccggccgatctggattgtttcgatggtctgttcaac
ttcaaccaggtgcgtccctccctgtttgacgggggttatgccttcggccgtgttgctggc
caggccgagctgcctgtgctgatcggcagcgcaggcaagggcacctacattgttgaagcc
gtcgcgcctcccggctacctccatgtgggcagtggtgaccagaacgtcgcttttggtgac
acgctcaaggcctccaccgcagccctgccattcgagtgcgtgggcatggaattgccggtg
cccgccaaactcacgctgttccctggtgaagacaaccccgcctatggcggtgcgggccaa
acatggcgcaagtgcgacatgaaagcggtccctctggtgcccggcaccaaccccgcaccc
aatttcttcctgtacaccgaagcgcccgtggcgggccacggcgtgggcttcatcctggac
gacaccgcgaccgagttcaaccgcttctcgccctcgttcggtgaaaaatacgcacccccc
catctgccggtttcggtgcaagactggaccgggcgagaaatcacgcgggtgtattcagac
cagtttggctcatacaacttcctgacgccttcgagcttcacgatcaatccgccttaccca
tcgggcgtgatgcccagcatgatggtttcgtgcatgaaccaccccggcccgatcatggac
acgcaagcgttcctctccgatggcaccacggccaaccccaacttcggcaagatggtcatc
gaccccttcttcaaccgcaagtacacccagttctgctacaccctgcagtacctggcgggc
aagaccacctacctcgacacgccggtgctgcccatcgccgcctttgcttcggtggacaag
aacccgctggactgcgaatgccaggatggcacacccgtcatctacagcgccaacaacgcc
aaccccgctgtcaacaacggcaacaacggcccctgggtgcccaatggtggcaacagcagc
gctcgcaccctgaccatcgtgtcagccgggcaagttgacgtgccgaatccggcatacgac
cccgccttaccgggctcgcctaagaacatcgtgcgtgactatggctttggcacttcgcaa
ggaaccatcaagctgggcaacaccaccctgacggcaaccacctggagcaacgacctcatc
gtggtcactgtgcccaacaacgccggcacgggccagctcatcattacccgcggtgacaac
ggcaagtcatccgtggtcggtctgaccgtgcatgtgggtggtctgaaacccatcgtggtc
cagcccggcgaaagtatccaggccgtgatcgatgcccccaccaccccggccggcgctttg
atcagcattccacccggcacctacaacgagtatgtggtcgccgacaagcgcgttcgcctg
cagggctggggcgccaactcggtggccatcaacgcctccaaggccagcgccggcggcctg
gccgcatggcgcacgctgatggccaagaaggtcgatgcgcgctgcagtctggccaatggc
aatgcgggggccgtgcccaatttcgtgacctatcccggcacgggctgccccgccggcaca
ccggtgaatgtagataccggcgggcctaccctggtcgtgggtccgaaccgcacctttgat
ctgctgccaggccaggccctgggcatgaacaaggccaacaacgagcccattttgttcagt
gccgaagaaggccctggcattctggccgtgggtcgcgctggcaacaaccagggcaccacg
tgtcaaaacgccggtgttgcgttccggatcgatggcttgacggtgacgggctccgattcc
ggcggcggcatcctggccagcggctacaactgcaacctgcaaatcacgaacaaccgggtg
gtgggcaactacggcacctacggcggtggtgtgcgggtcggccacacggcactggagagt
gacacggtctacacctctggcgtcaacacgggcgtggtcgtggcctacaactggatttcg
cagaatggtgcttccgaaatcgccaacggcgacggtggcggcggcggcgtgaccatgggc
acgggctccaacaactacctcgtgagcgagaactacatctgcggcaacttctccatgtcc
gatggcggcggcatcagccacgtgggcttctcggctggcagcaaccagatcctgaacaac
aagatcttgctcaaccagacgttcaatcaggccacagatcccaccggtggtggcctgttc
atcggaggccagatcacgcttcccggtggaacggacgaaggcacgggggatctcaccgtg
gaccgcaacctgattcagtacaaccatgcaggcgccggcgccggtggaggcgtgagcatc
gttcgtacccgaaacggcaacggcaacaacgccgacaacgtgctcctgacgaacaacatg
atcgtcaacaacgcgacggcctacgccggtggtggcgtggcggtggccgatgtgggcagc
aacgtgcgcctggtcaacaacaccgtggccggcaacaccagcaccgccaccaaccgccag
tccttccctcccacagggcagaaagtgcagtccacggcgcaggtggccggtattgcccgc
gtgagcggtggcaacaacagcagcccgaccctgctcaacaacatcgtgcatggcaaccac
gcctacacctggagcatcacacctgccaaccccggtcccaacgacgtgcagaccacggtg
ctgaccgacgccggcgtctgggatctgggcgtggtgggcaataccagcaagacggccctg
gcgtccagcaacagcgtgctcaccatcggggcgggcaacagcagcgccaacggcggcatc
caggcttccgattcgcaggttgcgttcgtcaggcccatcagcctcctgtcgcagaccgat
ccggatcagcctgtgatcttgcctgaaaccaccatcatgcaaacggcgctgacctttgac
gagggcggcaacttcatcaacgtcatcttcagcccactcaccccgtgggacctggacgac
ccagccgcgctgcgcgccgactaccacctccagagcggttcggtggcggtcaatgccggt
gccaaccgcaatggcaacaacggtgtgcccaccaatgactacgacggcgacgaccgactc
agaaccaatatagatgtgggagccgatgagttcggcgctggtggagggagcggtggtggt
caacccgccgtgagcatcaccggtgcatcgggtgccgcaacgttgaccgggagcacgctc
gacttcggaacccgcagcaacagcaacttctacagcatggtcaccttgacggtgggtggc
accgcaccggcaacctttggtgcggtggctgtgagcaacaccaactttgcagctttgctc
ggaaacagtttcggcacacgcacacccacagccgtcgatacctgttccggccagacggtc
gcggttggcaacacttgccagattgaagtgcgattcgctggtgggtttaccaacgccagc
aagactggcagcttgtccatctcctacaacggcgcatccagcccggtgaccttgtcactg
accggtcagtga
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