Hydrogenophaga sp. PAMC20947: E5678_06550
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Entry
E5678_06550 CDS
T05960
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03030
DNA replication
hyc03430
Mismatch repair
hyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5678_06550 (dnaQ)
03430 Mismatch repair
E5678_06550 (dnaQ)
03440 Homologous recombination
E5678_06550 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyc03032
]
E5678_06550 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_06550 (dnaQ)
Enzymes [BR:
hyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5678_06550 (dnaQ)
DNA replication proteins [BR:
hyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E5678_06550 (dnaQ)
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E5678_06550 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QCB45709
LinkDB
All DBs
Position
complement(1476877..1477584)
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AA seq
235 aa
AA seq
DB search
MRQIVLDTETTGLSPENGDRIIEIGCVELLNRKLTGNNLHFYVNPERDSHEDALKVHGIS
NEFLREKPKFDVIAQELLDYLDGAELIIHNAPFDMGFLNKEYSLMGWPSLRSRLSGVIDS
LVMAKEMFPGKRNGLDALCDRLEVDNSGRTLHGALLDAELLADVYINMTRGQDALLIEGE
ETAEEGQELVVVDLRQFELPVLRANEQEVQAHESGLQDLDKASKGKTLWRLSQPA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaatcgttcttgacactgaaaccaccggactttcgccagaaaacggcgatcgc
atcattgaaatcggatgcgtggagctgctgaatcgaaagctcaccggcaacaacctgcat
ttttacgtcaaccctgagcgcgacagccacgaagacgcgctcaaggtgcacggcatcagc
aacgagttcttgcgcgagaagcccaagttcgacgtgatcgctcaggagttgctggactac
cttgacggcgcagagctgatcatccacaacgcaccctttgacatgggcttcctcaacaag
gagtacagcctgatgggttggccgtccctgcgaagccggctctcgggcgtcattgacagc
ttggtcatggccaaggaaatgtttccgggcaaacgcaacggcctggatgccttgtgcgat
cgccttgaagttgacaattccggtcgaaccctgcacggcgccttgctggatgccgagctg
ctcgctgatgtctacatcaacatgacgcgaggccaggatgccctgctcatcgaaggcgag
gagacagccgaagaaggtcaggaactggtggtggtcgaccttcgtcaattcgaactgccc
gtgctgcgggccaacgaacaggaagttcaggcacacgaaagcggcttgcaagacctggac
aaagcttccaaaggcaagaccctttggcgcttgtcccaaccggcctga
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