Hydrogenophaga sp. PAMC20947: E5678_09445
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Entry
E5678_09445 CDS
T05960
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00860
Porphyrin metabolism
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
E5678_09445
Enzymes [BR:
hyc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
E5678_09445
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Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
Sigma70_r4
TrmB
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QCB46224
LinkDB
All DBs
Position
complement(2108812..2109291)
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AA seq
159 aa
AA seq
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MSLNDFDRRLIRATQAGLPLVPRPYEAVGATLGVSGEQVRERLQSMLETGLVRRIGAVPN
HYRLGFTANGMSVWDVNDALVDQLGARVGDLPGVSHCYRRPRRLPVWPYNLFAMLHGRSR
EEVEHQAQHIASMLGDACTSHDILYSTQILKKTGLRLSA
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaatgattttgaccgccggctgatccgtgccacacaggctggcctgccattg
gtacccaggccgtacgaagcggtcggggccaccctgggtgtctcgggcgaacaagtccgc
gagcgtttgcagtccatgctggagacgggcctggttcgccgcattggcgccgtgcccaac
cactaccggctgggcttcaccgccaacggcatgagtgtgtgggacgtaaatgacgccctg
gtggatcaactcggtgcgcgcgtcggcgacctgcccggcgtcagccactgttaccgccgc
ccgcgccgcctgccggtctggccctacaacctgttcgcgatgctgcacggccgctcgcga
gaagaagtcgaacaccaggcgcagcacatcgcgagcatgctcggcgacgcgtgcacctca
cacgacatcctttattccacccaaatcctgaaaaaaacaggtctgcgactgagcgcatga
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