Hydrogenophaga sp. PAMC20947: E5678_09560
Help
Entry
E5678_09560 CDS
T05960
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00300
Lysine biosynthesis
hyc00470
D-Amino acid metabolism
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01120
Microbial metabolism in diverse environments
hyc01230
Biosynthesis of amino acids
Module
hyc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E5678_09560 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E5678_09560 (lysA)
Enzymes [BR:
hyc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E5678_09560 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QCB46246
UniProt:
A0A4P7R8Q0
LinkDB
All DBs
Position
2134712..2135950
Genome browser
AA seq
412 aa
AA seq
DB search
MNPFSPALLRTLADQHGTPLWVYDADTIRQRIADLKRFDTVRFAQKANSNLQLLRLMREQ
GVVVDAVSRGEIQRALAAGFTAAPNAQGASGIVFTADLFDHATLETVVEHQIPVNAGSID
MLGQLGQRSPGHRVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTELPAALAAVKQHGLHL
VGLHMHIGSGVDYGHLQAVCAAMVTLVKNSGTDLEGISAGGGLSIPYQADEPRIDTDHYF
SLWDTARQEIAAHLGHQVHLELEPGRYLVAESGVLLAEVRATKYQGSQHFTLVDAGFSDL
MRPSMYGAFHSMSVIPAGGVERPQRATVVAGPLCESGDVFTQGEGGVVLTRELPEAQVGD
LLVLHDAGAYGASMSSNYNSRPLIAEVLVDGASHRLIRRRQTVEELLSLENV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttttctcccgccctcctccgcacactcgccgaccagcacggtacccccctg
tgggtctacgacgccgacaccatccgccagcgcatcgccgacctgaagcgtttcgatacc
gtgcgtttcgctcaaaaagccaactccaacctgcagttgctgcgcctgatgcgggaacaa
ggggtggtggtggatgcggtctcgcgcggcgaaattcagcgggcactggccgccgggttc
accgctgcgcccaatgcccaaggcgcctcgggtatcgttttcaccgccgatctgttcgac
cacgccaccctggaaactgtggtcgaacaccagattccggtcaacgcaggctccatcgac
atgctgggtcagctgggccagcgctcgcccggccaccgtgtctggctgcgcatcaacccc
ggctttggtcacggccacagcaacaagaccaacaccggaggtgaacacagcaaacatggc
atctggcacaccgagctgcccgccgctctggcggctgtgaaacagcacggcctgcacctg
gtcggcctgcacatgcacatcggctccggtgtcgactacggccatttgcaagcagtctgc
gcggccatggtgacgctggtgaaaaacagcggcaccgatctggaaggcatctcggccggc
ggtggcctgtccatcccgtaccaggccgacgagccccgcatcgataccgaccactacttc
agcctctgggacaccgcacgccaggaaatcgctgcccacctggggcaccaggtgcatctg
gagctggagcccggtcgttatctggtggccgaatcgggcgtgttgctggccgaggtgcgt
gccaccaaataccaggggagccaacacttcaccttggtcgatgccggcttttcagacctg
atgcgcccgtccatgtatggcgccttccacagcatgagcgtgatcccggcaggcggcgta
gaacgccctcagcgggccaccgtggtggccggccccctgtgcgaatcgggcgatgtgttc
acccaaggtgaaggcggtgtggtgctcacccgcgaactgccggaagcccaggtgggcgac
ctgctggtgttgcacgacgcaggggcctatggcgcctcgatgtcgagcaactacaacagc
cgcccgctgattgctgaagtgctggttgacggtgcttcgcaccgcctgatccgccgtcga
cagaccgtggaagaactgctgtccctggaaaacgtctaa
DBGET
integrated database retrieval system