Hydrogenophaga sp. PAMC20947: E5678_09625
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Entry
E5678_09625 CDS
T05960
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E5678_09625 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_09625 (mutS)
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
E5678_09625 (mutS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QCB48669
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Position
2171021..2173705
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AA seq
894 aa
AA seq
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MMQQYLALKAGYPNTLVFYRMGDFYELFFGDAEKAARLLDITLTQRGQSAGSPVVMAGIP
FHALDNYLARLIKLGESAAICEQVGDVATSKGPVERKVMRVVTPGTLTDSELLSDKSEAL
LMAVHPGARTGCGLAWMSVTQGIVFLAQCASDELADWMARIAPGEVLYSAEVSPAFEKSV
QSLASQQGVGGTRMVAVLRPAWAFDSGLGERKLLEQLQTASLAAWDAQALTDAHAAAAAL
LEYAEHTQGRALTHVKSLQVAHNDELIDLPSTTRRNLELTQTLRGESSPTLLSLLDVCHT
GMGSRQLRTWLLEPARDRGPARARLAALGVLRQGLGQRLRQSLKGASDVERITARTALRQ
VRPRELVGLGLTLARAAELAQGLAQELSADTAPVLLSKLGNDLIPPERCASLLRSALHAE
PAALVRDGGVIADGFDAELDELRAIQNNCDGFLIDLETRERERTGITNLRVQFNKVHGFY
IEVSQGQVSKVPDDYRRRQTLKNAERFITPELKAFEDKALSAQERALAREKWLFENLLDE
LQAFIPDLTRLARAIAALDALCALAERSLTLQWHEPQFVNEPCIEIRGGRHPVVEARLNE
TTGGSFIANDTLMGAKQRMQVITGPNMGGKSTYMRQVAVIVLLASMGSYVPAESCRLGPI
DAIHTRIGAADDLANAQSTFMVEMTEAAQILNAVTSKEAPGRPKLPVLPRGEDRAQPGPG
GAYSLVLMDEIGRGTSTFDGLALAGGIAAHLHDKAKAFTLFATHYFELTEFPAQHHAAIN
VHVSAVEGSGKANIVFLHQIEPGPASRSYGIQVARLAGVPTSVVQHARHALAALENQSSQ
NRDQVDLFAPPPVSEAPEAHPLQTALSGIDPDALSPREALEQLYTLKKLAQSTT
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagtacctcgccctcaaggcggggtatcccaacaccctggtgttctaccgc
atgggggatttttacgagctcttcttcggtgatgccgaaaaggcggcgcgcctgctcgac
atcacgctgacccagcgcggccagtcggccgggtcgcccgtggtcatggcgggcatcccg
tttcacgcgctcgacaactacctggcccggctgatcaagctgggcgagtccgcggccatc
tgtgagcaagtgggcgatgtggccacatccaagggcccggtcgagcgcaaggtcatgcgg
gtcgtcaccccgggcacgctgaccgactccgagctcctgtcagacaaatccgaagccctg
ctgatggcggtgcaccctggtgcacgcacgggttgcggcctggcctggatgtcggtcaca
cagggcatcgtcttcctggcccagtgcgccagcgacgaattggccgactggatggcccgc
atcgcccctggagaagtgctttacagcgccgaggtcagccccgcatttgaaaaatccgtc
cagtccctggcctcgcagcaaggcgtcggtggcacccgcatggtggccgtgctgcgcccg
gcctgggcctttgacagcgggctgggcgagcgcaaactgctggagcagttgcaaaccgcc
agcctcgccgcctgggatgcccaggccctcaccgacgcccacgcggcggcggctgcgttg
ctggaatacgccgagcacacccaggggcgcgcgctcacacacgtcaagagcctgcaagtg
gcgcacaacgacgagctgatcgacttgccttcgaccacacgccgcaaccttgaactcacg
caaaccctgcgaggcgagagcagccccaccctgctgtcgctgctcgatgtctgccacacc
ggcatgggcagccggcagctgcgcacctggctgctcgagccggcgcgtgaccggggcccg
gcgcgtgcccgccttgcggcgctcggtgtgttgcgtcaggggctgggtcagcgcctgcgc
cagtcactcaaaggcgccagcgatgtcgaacgcatcacggcccgcaccgccctgcgccag
gtgcgcccccgcgaactggtgggcctgggcctgaccctcgcgcgggccgccgagctggcc
cagggcctcgcccaagagctgtccgccgacacagcacccgtactgctcagcaagctgggc
aacgacctgattcctcccgagcggtgtgcatccctgctgcgcagcgccttgcatgccgag
ccagccgccctggtgcgcgacggtggcgtgatcgccgatggtttcgacgccgaactcgat
gagctgcgcgccatccagaacaactgcgacggttttctgatcgacctcgaaacccgcgag
cgcgagcgcaccggcatcaccaacctgcgggtgcagttcaacaaggtccatggtttctac
atcgaagtctcacaaggccaggtcagcaaggtgcccgacgactaccgccgccggcaaacc
ctcaaaaacgccgagcgcttcatcacgcccgaactcaaagccttcgaagacaaagccctg
tcggcccaggaacgcgctttggcgcgggagaaatggctgtttgaaaacctgctcgacgaa
ctgcaggccttcatccccgacctcacccgtctggcgcgcgccatcgcggcgctcgatgcc
ctgtgtgcgctggccgagcgttcgctcacgctgcagtggcacgagccccagttcgtcaac
gaaccctgcatcgaaattcggggcgggcgccaccccgtggtggaagcgcggctcaacgaa
accaccggcggcagcttcatcgccaacgacaccctcatgggcgccaagcaacgcatgcag
gtcatcaccggccccaacatgggcggcaagagcacctacatgcgccaggtcgcggtgatc
gtcttgctcgccagcatgggcagctacgtcccagccgagagctgccgactcggccccatc
gacgccatccacacgcgcattggcgccgccgacgatctggccaacgcccagtcgaccttc
atggtggaaatgaccgaagccgcgcaaatcctcaacgcggtcacgtccaaggaagcgccg
ggccgccccaagcttcctgtcctccctcggggggaggaccgggctcagcccggtccaggg
ggcgcctattcactggtgctgatggacgaaattggccgcggcacatccacctttgacggc
ctggcgctggccggcggcattgcggcccacctgcacgacaaagccaaggccttcaccctg
tttgccacccactatttcgagctcaccgaattccccgcgcaacaccacgccgccatcaat
gtgcacgtgagcgcggtggagggcagcggcaaggccaacatcgtcttcctgcaccagatc
gagcccgggcccgccagccgcagctacggcattcaggttgcccggctggccggcgtgccc
acatcggtggtgcaacacgcccgccacgcactggccgcgctggaaaaccagagcagccag
aaccgcgatcaggtcgacctctttgccccgccgccggtgagcgaagcgcccgaagcacat
cccctgcagaccgccctgtcaggcatcgatcccgacgccctgtcaccgcgcgaagcgctg
gaacagctctacaccctcaaaaaactcgcccaatccaccacatga
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