Hydrogenophaga sp. PAMC20947: E5678_09940
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Entry
E5678_09940 CDS
T05960
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyc03009
]
E5678_09940
Enzymes [BR:
hyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
E5678_09940
Ribosome biogenesis [BR:
hyc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E5678_09940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
ACC_epsilon
Motif
Other DBs
NCBI-ProteinID:
QCB46314
LinkDB
All DBs
Position
complement(2228758..2229300)
Genome browser
AA seq
180 aa
AA seq
DB search
MSDASRLICFNKPYGVLSQFTPEGRWRGLKDFIDVPGVYVAGRLDADSEGLLLLTNDGQL
QARISDPRHKMEKTYWVQVEGEPDDAALAALCAGVTLNDGPTRPARAQRIPVPAQLWERD
PPVRFRQSIPTSWLELVIREGRNRQVRRMTAAVGFPTLRLIRAAIGPYALEGLAPGNWRG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgcttcccgcctgatctgtttcaacaagccctatggcgtcttgagccaattc
acgcccgaagggcgctggcgcgggctgaaagatttcatcgatgtgcctggcgtgtatgtg
gccgggcggctggatgccgatagcgagggattgctgctgctcaccaacgacgggcagctg
caagcccgtatcagcgacccgcgccacaaaatggaaaagacctattgggtgcaggtggag
ggcgaacccgacgacgcagccttggctgctttgtgcgctggcgtcacgctgaacgatggt
cccacccgccccgcacgcgcgcagcgaatccctgtgccagcccagctttgggagcgagac
ccgccggtgcgttttcggcaatcgatcccgacgagctggctggagctggtgatccgggaa
gggcgcaaccggcaggtgcgccgcatgacggccgcggtggggttccccaccttgcgcctg
atccgagcggccattgggccttatgcgctggaaggtctggcgccagggaattggcgaggt
tga
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integrated database retrieval system
