Hydrogenophaga sp. PAMC20947: E5678_11240
Help
Entry
E5678_11240 CDS
T05960
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5678_11240 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_11240 (mutM)
Enzymes [BR:
hyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E5678_11240 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E5678_11240 (mutM)
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5678_11240 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
HscB_4_cys
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QCB46550
UniProt:
A0A4P7R8P2
LinkDB
All DBs
Position
complement(2503619..2504434)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRLSFADRIAGAEVLDVHLGKPLRWPLGCEARRLVGQTVQRVTRRGKYLLL
HLNEGIVLMHLGMSGSLRFAVSLPELGVHDHFELRTSRGVLRLHDPRRFGAVVFAASLDD
ASARKLLDHLGVEPLEAGFDPDAFHRALKLRRASIKQVLLAGDIVVGVGNIYASEALFRA
GIRPSLRADRLSKPRALRLHGAIVSVLQRALAMGGSTLRDFSSAEGQSGYFQMDAMVYGR
EGQACRICGSPIRSIRQGQRSTFFCPQCQKL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagttgaagtcacgcgcctgagctttgcggatcgcatcgctggc
gccgaggtgctggacgtgcacctgggcaagcctttgcgatggccgctgggctgtgaggcg
cgcaggctggtgggtcaaacggtgcaacgggtgacgagacggggcaagtacctgttgctt
catctgaatgagggcattgtgttgatgcacctgggcatgtcggggagtttgcgctttgcc
gtgagcctgccggaattgggcgtgcacgaccattttgaactcagaaccagtcggggcgtt
ctgcgcctgcacgaccccaggcgctttggtgcggtcgtgtttgccgccagcctggatgat
gcttcggcgcgcaagttgctggatcacttgggggtggagccactggaggcgggttttgac
ccggacgcctttcaccgggccttgaagcttcgccgcgccagcatcaaacaggttttgctg
gcgggcgacatcgtggtgggggtgggcaatatttacgcgtccgaggctttgttccgggcc
ggtattcgccccagtttgcgagcggatcgcctgagcaaaccccgtgccttgcgcctgcac
ggtgccattgtctcggtattgcaacgggcgctggccatgggaggcagtactttgcgtgat
ttttccagtgccgagggccagagcggttactttcagatggatgccatggtgtacgggcgt
gaggggcaagcctgccgtatctgtggctcgccgatccgctcgattcggcagggccagcgg
tcgacattcttttgcccgcaatgccagaagctgtga
DBGET
integrated database retrieval system
