Hydrogenophaga sp. PAMC20947: E5678_13010
Help
Entry
E5678_13010 CDS
T05960
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyc03016
]
E5678_13010
Enzymes [BR:
hyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
E5678_13010
Transfer RNA biogenesis [BR:
hyc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
E5678_13010
Prokaryotic type
E5678_13010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_3
Lactamase_B_4
LPAM_1
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
QCB46860
LinkDB
All DBs
Position
complement(2871068..2872048)
Genome browser
AA seq
326 aa
AA seq
DB search
MKRILLALISLVVLSSHTAVLAQAHAQPAAADEFRVTLLGTGSPAPVMRRFGPGVLIQAG
GKRLLIDAGRGVTQRLMQAGLRLGQVDAVLLTHLHSDHIVGLPDLWLTGWLEAGYAQRKG
PLVVYGPVGTQNLMSGLAQAFDWDIKARIADQGLDAKAIGSNVTELKPGVVFDAGGLKVT
AIEVDHGELLQPAFAYRVDFEGRSVTVSGDTRFSENLIDKAAGTDLLIHQVAAARPELLK
LPAFKVIMEHHTSPEEAGTVFSRVKPRLAVFYHFVLLGTPAVPAVNEATVLELARKTYSG
PLLIGEDLMAFRLERDQVIPLSSRHP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcattttgctggctctcatttcattggtggtgttgtcatcgcacaccgccgtt
ctggctcaagcgcacgcccagccggcagctgcagacgaatttcgcgtcacgcttcttggc
acgggcagtccggctccggtgatgcggcgctttggaccgggtgtactgattcaggcaggc
ggcaagcgcttgctgatcgacgcgggccgaggcgtcacacagcggttgatgcaggccggg
ttgcgcctgggccaggtggatgcggtgcttttgacccacttgcactccgatcacatcgtg
ggcctgcccgacctttggctcaccggctggctggaggcgggttatgcacagcgaaagggg
cctttggtggtttatggccctgtgggaacgcagaacctgatgagtggcctggcccaagct
tttgactgggacatcaaggcccgcatcgctgatcaagggctggacgccaaggccattggg
tcgaatgtcaccgaactgaagcccggtgtggtgttcgacgctggcgggctcaaagtgacg
gcgatcgaagtcgaccacggtgaactgttgcaacccgcatttgcttaccgtgttgatttt
gagggtcgatcggtcacggtgtcgggggacacgcgcttcagcgagaacctcatcgacaaa
gccgctggcaccgatctcttgatccaccaggtggcggcggcccgacctgagcttctgaag
ctgccagccttcaaagtgatcatggaacaccacacctcacccgaagaggccgggaccgtg
ttcagccgtgtgaagccccggctggccgttttctaccactttgttctgcttggaacaccc
gcggtgcctgctgtgaacgaagcgacggtgctggagctggcccgcaaaacttattcaggg
ccgctattgatcggagaagacctgatggctttccgtctggagcgggaccaggtgatccct
ctttcttcacgccatccctga
DBGET
integrated database retrieval system
