Hydrogenophaga sp. PAMC20947: E5678_14540
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Entry
E5678_14540 CDS
T05960
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E5678_14540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyc02000
]
E5678_14540
Transporters [BR:
hyc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E5678_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
NMT1
Motif
Other DBs
NCBI-ProteinID:
QCB47135
LinkDB
All DBs
Position
3196030..3197007
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AA seq
325 aa
AA seq
DB search
MTSTQWLRRTATCLALTLPAAAMAQTIIKVSDVQPAGYPNVVALENMGKKLEAATNGKFK
FQMYPGGVLGSEKEMIEQAQVGALQIARISLGPMGPVVPDVNVFNLPFLFRDEGHMRAVI
DGPIGKEILDKITASSAKLVGLGWMDSGSRSMYTKNAIKTPDDLKGQKIRVMGNPMFVEM
MNAMGGNGISMGHNDTFSALQTGVVDGAENNPPTFFASNQYTAGPKFYSQTTHLIIPELF
VMSKITWDKFSKDEQALVMKFSREAQMEQRALWDKSVGDYTAKLKAYGIQFVTLDKKPFY
DATAPMRAKYGSQYADLIKRIEATK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaacccaatggctgcgccgcaccgcaacctgcctcgccttgacccttcccgcc
gccgcgatggcgcaaaccatcatcaaggtgtccgacgttcaaccggctggctaccccaac
gtggtggcgctcgagaacatgggcaagaagcttgaggcggcgaccaacgggaaattcaag
ttccagatgtaccccggtggtgtgctgggcagtgaaaaggaaatgattgaacaggcccag
gtcggcgctctgcagatcgcccgcatctccttgggccccatgggcccggtggtgcccgac
gtcaacgtgttcaacctgccattcttgttccgcgatgagggccacatgcgtgccgtgatc
gacggcccgatcggcaaggaaattctcgacaagatcaccgccagctcggcaaaactggtc
ggccttggctggatggacagcggctcacgcagcatgtacaccaagaacgccatcaagacg
cccgacgacctgaaaggtcaaaaaatccgcgtcatgggcaaccccatgtttgtggaaatg
atgaacgctatgggtggcaatggcatcagcatgggccacaacgacaccttcagcgccttg
cagaccggcgtggtggatggcgcggaaaacaacccgcccacattcttcgccagcaaccag
tacaccgccggccccaagttttattcgcaaaccacccacctgatcattcccgagctgttc
gtgatgtccaagatcacctgggacaagttttcgaaagacgagcaggcgctggtgatgaag
ttttcgcgcgaagcccagatggaacagcgtgcgctgtgggacaaatcggtcggcgactac
accgccaagctcaaggcctacggcatccagtttgtcaccctcgacaaaaagcccttctat
gacgcaaccgccccgatgcgcgcgaagtacggctcccaatacgctgacctgatcaagcgc
atcgaagccacaaagtaa
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