Hydrogenophaga sp. PAMC20947: E5678_14880
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Entry
E5678_14880 CDS
T05960
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyc03009
]
E5678_14880 (rsmI)
Enzymes [BR:
hyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
E5678_14880 (rsmI)
Ribosome biogenesis [BR:
hyc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
E5678_14880 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
QCB47195
UniProt:
A0A4P7RCQ3
LinkDB
All DBs
Position
3267407..3268360
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AA seq
317 aa
AA seq
DB search
MSVSPPSLLIAARESAAHQHYPQGTLYMVATPIGNLADISLRALHVLSLVDTVACEDTRH
TAGLLQGYGLHKPLLAVHEHNEAEASQTVVQRLQAGQRVAYVSDAGTPGVSDPGARLAQA
VAAAGLRSVPLPGPSSITALLSVSGHAGWDGQFVFRGFLSPKAGERQRDVQHLAQDPRAV
VLLEAPHRIEALAKDLAILGERTLTVGRELTKQFEEVAQMPAMAFGAWLRDGAHRTRGEF
ALMLHPLDTGGTDASGPDQESLRTLDLLLAELPVKTAVRLCAEITGQPRNALYQAALARK
AESQAQTRDAGEDTAED
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgtcagccctccgtcccttttgatcgccgcacgcgaaagcgccgcgcaccagcat
tatccgcagggcacgctgtacatggtggccacgcccatcggcaacctggccgacatcagc
ctgcgtgcgctgcatgtgctctcgctggtggacacggtggcttgcgaagacacgcgccac
accgcgggcctgctgcagggctacggcttgcacaagccgctcctggcggtacacgaacac
aatgaagccgaggcctcgcagaccgtggtgcagcggttgcaagccgggcagcgggtggct
tatgtgagcgatgcgggcaccccgggcgtgagcgatccgggcgcccgtctggcccaggct
gtggcggcagcaggcctgaggagcgtgccactgccgggtccaagcagcatcacggcgctg
ctcagcgtgtccggccatgcaggctgggacggtcagtttgtatttcgcggctttctgtcg
cccaaggcgggcgaacgccagcgggatgtgcaacacctcgcacaagatccccgagcggtg
gtcctgctggaagcgccccaccgcatcgaggcattggccaaagacctggccattctggga
gagcgcaccctcactgtcggccgcgagctcaccaaacagtttgaagaagtggcccaaatg
cccgcgatggcctttggtgcatggctgcgcgatggcgcccaccgcacccggggtgaattt
gcgctgatgctgcacccgctcgacaccggaggcaccgacgcctcgggccccgatcaggag
agtttgcgcaccctggatctgctgttggcggagttgccggtgaaaaccgcggtgcgcctg
tgcgccgagatcaccggccaacctcgaaacgccttgtaccaggcggcattggcccgaaag
gccgaaagtcaggcccaaacacgggacgcgggcgaggacaccgccgaagactga
DBGET
integrated database retrieval system
