Hydrogenophaga sp. PAMC20947: E5678_15380
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Entry
E5678_15380 CDS
T05960
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5678_15380 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_15380 (priA)
Enzymes [BR:
hyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5678_15380 (priA)
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5678_15380 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
DUF5817
AAA_30
T2SSE
AAA_33
zf-HYPF
Motif
Other DBs
NCBI-ProteinID:
QCB47284
UniProt:
A0A4P7RCD3
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All DBs
Position
3374920..3377118
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AA seq
732 aa
AA seq
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MAFWPNVIVATPAHSGMGHTLTYRSELSLTPGSLVRVPLGTREVLGVVWDCGDQPPEGLS
QAQTKAVASVLEGLPALNGRWLQLVRFASQYYQRGLGEVALAALPPQLRELDGVQLARRL
KKRAKQASPDPKASRSPAVADREAAPALPDGQSPAENPPLTQTLSAEQAEALASLEHATA
PILLHGATGSGKTEVYLQTTRRALDTVSPDGVLTQVLVMVPEINLTPQLEARFRERFEPL
YGAGAVVCLHSGMTPAQRLASWLSAHTGGARIVLGTRMAIFASLPGLRLIVVDEEHDPSY
KSQEGARYSARDLAVYRAKIETDALAASGQRCQVILGSATPSLESWHAADLGRYLRLAMP
GRIGGGALPRLRLIDMNNQPKGAVVAPPLLAAMAERIQRGEQCLVLLNRRGYAPVLACHD
CGWKSGCPHCSAYRVFHKLDRTLRCHHCGFTERVPRACPDCGNLDIAPVGRGTEQLEEQL
AALLADVRRPDGQPPRVARMDADTTRLKGSLESQLAALHSGEVDVLVGTQMIAKGHDFRR
ITLVAGLNADSALFASDYRAPERLFALLMQAGGRAGRDAAFMGAQGGASEMWIQTWYPDH
PLFATLKLHDYPGFATEQLHEREIAGMPPYGAQALLRADARTQAAAQAFLNLAAEQAIGL
PHRDDITLYPAVPLTIQRVANVERAQMLVESGSRAALQRFLAAWQPVLHAARSAPEARGL
VRWAVDVDPLAI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggctttttggcccaatgtcatcgttgccaccccggcccacagcgggatggggcacacc
ctgacctaccgaagtgagctttcgctcacgccggggagcttggtgcgggtgccgctgggc
acgcgcgaggtgttgggggtggtgtgggactgcggcgaccagccgcctgaaggtctgtcg
caggcacagaccaaagcggtggccagcgtgcttgaaggtttgccggcgctcaacggccgg
tggttgcaactggtgcgttttgccagccagtattaccagcgcggcctgggcgaggtggcg
ctggccgcgctgccgccgcaactgcgggagctcgatggcgtgcaactggcgcggcggttg
aagaaacgcgcgaaacaggccagccccgatcccaaagccagccgttcacctgcggttgct
gaccgggaggcagccccggccctgcccgacggccagtccccagctgaaaacccgcccctc
acccagaccctgagcgcggagcaggccgaggccctggccagcctggagcacgccaccgcg
cccatcttgctgcacggcgccaccggcagtggcaaaaccgaagtgtatttgcagaccacg
cgccgggcgctggacacggtctcgcccgatggcgtgctcacgcaggtcctggtgatggtg
cccgagatcaacctcacacctcagcttgaagcccgctttcgtgagcgattcgagccactg
tatggcgcgggggcggtggtgtgcctgcacagcggcatgacgcctgcgcagcggctggcg
agctggctgtccgcccacacgggcggcgcgcgcattgtgctcggcacccgcatggcgatc
ttcgcaagcctgccaggcttgcggctgatcgtggtcgacgaagaacacgaccccagctac
aaaagccaggagggcgcgcgctattcggcccgcgacctggccgtgtaccgcgccaagatc
gagaccgacgccttggcggccagcggccagcggtgccaggtgatcctgggctcggcgaca
ccctcattggaaagctggcacgccgccgacctgggccgctacctgcgcctggccatgccc
gggcgcatcggcggaggcgccctgccccggctgcggctcatcgacatgaacaaccagccc
aagggcgcggtggtggcgccgccgttgctggccgccatggccgagcgcatccagcgcgga
gagcagtgcctggtgttgctgaaccggcggggctatgcccccgtgttggcctgccacgat
tgcggctggaagagcggctgcccccattgcagcgcctaccgggtgtttcacaaactcgac
cgcacgctgcgctgccaccactgcggcttcaccgagcgggtgccgcgggcctgcccagac
tgcggcaacctcgacatcgcgccagtgggacggggcaccgagcaactggaagaacagctg
gccgcgctgctggcggatgtgcgccgtccggatggccagccgccccgcgtggcgcgcatg
gacgccgacacgacgcgcctcaaaggcagccttgagagccagctcgcggccttgcacagc
ggcgaggtggatgtgctggtgggcacccagatgatcgccaagggccacgatttccggcgc
atcactctggtggccgggctcaacgccgactcggcccttttcgcgagcgactaccgggcg
cccgagcggctgtttgccttgctgatgcaggcgggcgggcgcgctgggcgcgatgcggcc
ttcatgggtgcgcaggggggtgccagcgaaatgtggatccagacctggtacccggatcac
ccgctgtttgccacgctcaagcttcacgactacccaggctttgccaccgagcaactccac
gagcgcgagatcgcaggcatgccgccgtatggcgctcaggctttgctgcgcgccgatgcg
cgcacccaggctgcagcccaggccttcctcaacctggccgccgaacaggcgatcggactg
ccccaccgcgacgacatcacgctttaccccgccgtgccgctgaccatccagcgtgtggcc
aacgtggagcgggctcagatgctggtggaaagtggttcgcgcgctgcactgcaacgtttt
ctggcggcctggcaaccggtgttgcatgcagcgcgcagcgcgcccgaagcgcgcggcctg
gtgcgctgggcggtggacgttgaccctctggcgatctga
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