Hydrogenophaga sp. PAMC20947: E5678_15625
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Entry
E5678_15625 CDS
T05960
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5678_15625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_15625
Enzymes [BR:
hyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E5678_15625
DNA repair and recombination proteins [BR:
hyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5678_15625
Prokaryotic type
E5678_15625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCB48763
UniProt:
A0A4V1CIF1
LinkDB
All DBs
Position
complement(3424666..3425397)
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AA seq
243 aa
AA seq
DB search
MDWGTPPGAPSTVPRLETADPRAWPVAPDGRGLADRFWASAAGVQLQAFLQERLLAGATI
YPPEPLRALALSPLGAVRVVILGQDPYHGPGQAEGLAFSVAPGIKTPPSLRNIFLEMQRD
LGLTLPVQGSLVRWAKQGVLLLNTALTVEDGLPGSHAGRGWEVLTDDVVRHCSDHGMPKA
FLLWGAHAQKKAVLIDAERHLVLSANHPSPLSARRGPAPFLGCGHFGSVDKWIEKGGQSP
IIW
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ctggactggggtacgccccccggggcaccgtcgaccgtgcccaggctggagaccgcagac
ccccgcgcttggccggttgcgcccgacggccggggcctggcggaccggttttgggcatcg
gccgccggcgttcagctacaggcctttttgcaggaacggttgctcgccggcgccaccatc
tacccccctgagccgctgcgagccctggcgctttctcccttgggggccgtgcgggtggtg
attctcgggcaagacccctatcacggccccggtcaagccgagggcttggcgttttcagtc
gcgcccggcatcaaaacgcctcccagcctgcgcaatatctttctggaaatgcaacgcgac
ctcgggctaaccctgccagtccaagggtcattggtgcgctgggcgaagcagggggtcttg
ctgctgaacacggcgctcacggtggaagacggcctgccgggcagccatgcgggtcgaggc
tgggaggtgctgaccgacgatgtggttcgccattgcagcgaccatgggatgcccaaagcc
ttcctgttgtggggcgcccatgcccaaaagaaggccgtgttgatcgacgctgagcggcac
ctggtgttgtcggccaaccatccgtcaccactgtcggcgcgccgcggacccgcgccgttc
ctgggctgtggccattttgggtccgttgacaagtggatcgagaagggcggccaatcgcca
attatttggtga
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