Hydrogenophaga sp. PAMC20947: E5678_16220
Help
Entry
E5678_16220 CDS
T05960
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyc03000
]
E5678_16220
03036 Chromosome and associated proteins [BR:
hyc03036
]
E5678_16220
Transcription factors [BR:
hyc03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
E5678_16220
Chromosome and associated proteins [BR:
hyc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
E5678_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
AsnC_trans_reg_3
MarR
HTH_20
MarR_2
HTH_5
HTH_11
TrmB
HTH_IclR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QCB47432
LinkDB
All DBs
Position
complement(3534088..3534555)
Genome browser
AA seq
155 aa
AA seq
DB search
MSFKPDAVDRQLLTALQKNGRTTVGELAELVSLSPSPCWRRVRQLEDRGVIAGYHARLDR
KLLGYGVLGFVHLAMHDHTPEKGDAFEREVVALPQILSCHNLSGRFDYQLEVVAQDLEAF
AEFVRNNIRGLPGVREISTSFSLKEVKRSYEVPVN
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaagcccgacgctgttgatcgccaactgctcaccgccctgcaaaaaaacggg
cgcaccaccgtgggcgaactggccgagttggtgtctttgtcgccatcgccttgctggcgg
cgtgtgcgtcagctggaagaccgcggtgtgatcgcgggctaccacgcccgcctggaccgc
aagctgctgggttacggtgtgttgggctttgtgcacctcgccatgcacgaccacacccct
gagaagggcgatgcctttgagcgcgaagtggtggccttgccgcagatcctgtcgtgccac
aacctctcgggccgcttcgactaccagctcgaagtggtcgcgcaggatctggaggcattt
gccgaatttgtgcgcaacaacatccggggattgccgggggtgcgcgagatctcgaccagc
ttctcgctcaaggaagtgaagcggtcttatgaagtgcctgtgaactga
DBGET
integrated database retrieval system
