Hydrogenophaga sp. PAMC20947: E5678_16325
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Entry
E5678_16325 CDS
T05960
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00550
Peptidoglycan biosynthesis
hyc01100
Metabolic pathways
hyc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5678_16325 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5678_16325 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyc01011
]
E5678_16325 (mrdA)
Enzymes [BR:
hyc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E5678_16325 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hyc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E5678_16325 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QCB47448
LinkDB
All DBs
Position
3570097..3572085
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AA seq
662 aa
AA seq
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MTELRNVEADLSQFRTRVAVVGLAVLFAFGLLASRMVYLQVVRHEDLAAQAESNRTAVLP
VVPNRGQILDRKGRVLATNFSAYTLEITPSEVEDLDTTLDSLGELLEITPRDKRRFRKLV
DESRKFDSLPLRTRLSDEEVARFTVQRYRFPGVDVRARLIRHYPNGDVASHVIGYIGRIN
QREKEQIEDWPEEDQANYRGTDYIGKLGAEQHYERELHGLTGFERIETSAGGRAVRSLAN
TPATPGNTVVLAIDIQLQKLVEDMFGDRRGALVAIDPRNGEVLAFVSKPTFDPNLFVEGI
DVENWKALNESVDKPLLNRALRGTYPPGSTYKPFMALGALETGVRSASTVINDPGYWMFG
NHRFRSHGDGGLGAVDMRRSIVKSSNVYYYSLANEMGVDAMHDFMAPLGLGQITGIDLRG
EVRGVLPSQEWKRNAYKRPEHQRWYAGETISLGIGQGYNNFTMLQMAHAMATLAGGGIKH
QPHLTLATEDVITHERKPLPVSPPVNLGFKQANIDVVLRAMQGVTTEGTGARVFAGAGYE
SGGKTGTAQAVTIGQKEHYDARKLEEHQRDHSLYLAFAPVDKPRIALAVVVENAGFGAAN
AAPIARRVFDYLLLDQYPNAQDLKAVQQGQAGAPIGTPLKASEMPWPPEPTAPTAQGATN
PG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagttaaggaacgtcgaagccgatctgtcccagttccgcacccgcgtggcggtg
gtggggttggcggtgctgtttgcgtttggcttgctggcttcgcgcatggtgtacctgcag
gtggttcgccacgaagacctcgcggcccaggccgagagcaaccgcaccgcggtgctgccc
gtggtgcccaatcgcggccagatcctggatcgcaagggccgcgtgctcgccaccaacttc
tccgcctacaccctagagatcaccccctccgaggtagaagacctcgacaccaccctcgac
tccctgggcgagttgctggaaatcacccccagagacaagcggcgctttcgcaagctggtc
gacgagtcgcgcaagttcgactccctgcccctgcgcacccgtctgtccgacgaagaggtc
gcccgcttcacggtgcagcgttaccggtttccgggcgtggacgtgcgggcccgcctgatc
cgccactaccccaatggcgacgtcgccagccacgtgatcggctacatcggccgcatcaac
cagcgcgaaaaagaacagattgaagactggcccgaggaagaccaggcgaactaccgcggc
accgactacatcggcaagctcggcgccgaacaacactacgaacgcgaactgcacggcctc
accggcttcgagcggattgaaacttcggccggcggccgggcggtgcgctcactggccaac
acacccgccaccccgggcaacaccgtggtgctggccatcgacatccagctgcaaaaactc
gtcgaagacatgttcggcgatcgccgaggcgccctggtggccattgatccgcgcaatggc
gaggtgctggcctttgtgagcaaacccacgttcgaccccaatctttttgttgagggcatc
gacgtcgagaactggaaagcgctcaacgaatcggtggacaagcccctgctcaaccgggcc
ctgcgcggcacctacccgcccggctccacctacaagcccttcatggcgctgggcgccctc
gaaaccggcgtccgcagtgcctccaccgtgatcaacgatccgggctactggatgttcggc
aaccaccggttccgcagccatggcgacggcggtctcggggctgtcgacatgcgccgcagc
atcgtcaagtcgagcaacgtctactactactcgctggccaacgaaatgggcgtggacgcg
atgcacgatttcatggcccccctgggtttggggcaaatcaccggcatcgatctgcgcggc
gaagtgcgcggcgtcttgccaagtcaggaatggaagcgcaacgcctacaagcgcccggag
caccagcgctggtatgcaggcgaaaccatctcgctgggcatcggccaggggtacaacaac
ttcaccatgcttcaaatggcccatgccatggccacgctggccggcggcggcatcaagcac
cagccccacctcacgctggcgaccgaagacgtgatcacccacgaacgcaagcccttgccc
gtcagcccaccggtcaacctcggattcaagcaggccaacatcgacgtcgtgttgcgcgcc
atgcaaggcgtgaccaccgaaggcaccggggcacgtgtgttcgcaggtgcaggctatgag
agtggtggcaaaaccggcaccgcccaggccgtcaccatcggccagaaagagcactacgac
gcacgcaagctcgaagagcatcaacgcgaccactcgctctatctggccttcgccccggtt
gacaagccccgcatcgccctcgcggtcgtggtggaaaacgccggctttggcgccgccaac
gcagcgcccatcgcacgccgcgtgttcgactacctgttgctcgaccagtacccgaacgcg
caagacctcaaagccgtgcaacaaggccaggccggcgcccccatcggcactccgctgaaa
gccagcgaaatgccctggccccccgagcccaccgccccgacagcccagggcgcgaccaac
ccgggttga
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