Hydrogenophaga sp. PAMC20947: E5678_16440
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Entry
E5678_16440 CDS
T05960
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyc03000
]
E5678_16440
Transcription factors [BR:
hyc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E5678_16440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QCB47471
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All DBs
Position
complement(3593965..3594855)
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AA seq
296 aa
AA seq
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MNQDLNYKHLYYFWVTAKEGGMSHAAARLGMAVQTVSAQVRLLEQSLGAALFKPAGRGLA
LTDAGHAALQVAEQIFQLGEQLHTVVHDVTSHATVRLAVGISDGLSKLAVRELLSPVMAE
PHLRLLCHEGEFDDLLADLALHRLDVVLSDRPAPANPNLKLYSHALGASNLGWYAPKAMY
EQALAGFPGSLAEVPVLLPTAHASVRLRLDQWFEQHGVVPHIVGEFEDSALLATFGSSGM
GVFPASDLMREKLSQGYGMQWLAPCEGVQEHFFAIGTARKVQHPLVQRLLTQPAQT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagacctcaactacaagcacctttactatttctgggtcaccgccaaggaaggc
ggcatgtcccacgccgccgcgcgcctgggcatggcggtgcagaccgtgagcgcgcaggtg
cgcctgctggagcagtcgctgggcgctgcgctgttcaaacccgccggccgtgggctggcc
ttgaccgatgcggggcacgcggccttgcaggtggccgagcagatcttccagctcggcgag
cagttgcacacggtggtgcacgatgtgaccagccatgccaccgtgcgcctggcggtgggc
atatctgacggcttgtccaaactggcggtgcgcgagttgctgtcgcccgtgatggccgaa
ccccacttgcgtttgttgtgccacgaaggcgaattcgacgatctgctggcggatctggcg
ttgcaccggctcgatgtggtgctgtcggatcgcccggcgccggccaatcccaacctcaag
ctctacagccacgccctgggtgcatccaacctcgggtggtacgcgcccaaggccatgtac
gagcaggccttggccggtttcccgggcagcctcgccgaggtgccggtcctgttgcccacg
gcccatgcctcggtgcgcctgcgcctggaccagtggttcgaacaacacggggtggtgccc
cacatcgtgggcgagtttgaagacagcgccttgctggccacttttggctccagcggtatg
ggcgtgtttccggcctctgatctgatgcgggagaagctctcgcaaggctatggcatgcag
tggctggcaccttgcgagggcgttcaagaacacttctttgccatcggtaccgcgcgcaag
gtgcaacacccgctggtgcagcgcctgctgacccagccggcgcaaacctga
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