Hydrogenophaga sp. PAMC20947: E5678_17445
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Entry
E5678_17445 CDS
T05960
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00270
Cysteine and methionine metabolism
hyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
E5678_17445 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyc03000
]
E5678_17445 (dcm)
03032 DNA replication proteins [BR:
hyc03032
]
E5678_17445 (dcm)
03036 Chromosome and associated proteins [BR:
hyc03036
]
E5678_17445 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hyc02048
]
E5678_17445 (dcm)
Enzymes [BR:
hyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
E5678_17445 (dcm)
Transcription factors [BR:
hyc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
E5678_17445 (dcm)
DNA replication proteins [BR:
hyc03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
E5678_17445 (dcm)
Chromosome and associated proteins [BR:
hyc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
E5678_17445 (dcm)
Prokaryotic defense system [BR:
hyc02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
E5678_17445 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_3
Xre-MbcA-ParS_M
HTH_28
HTH_23
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
QCB47654
UniProt:
A0A4P7RDB0
LinkDB
All DBs
Position
3799217..3800509
Genome browser
AA seq
430 aa
AA seq
DB search
MSHFYPAGDFMTLTTFDQQAAIDYINAAKLARPTLDLAEHFGIAKRTLQRWKSGEVAPPA
HVVGELQRLLQFGAVKKPVGDFKFIDLFAGIGGIRNAFEAIGGECVFTSEWDGYAQKTYL
ENFSDGHPLNGDITQIEAQDIPDHDVLLGGFPCQPFSIAGVSKKNALGRAHGFKDATQGT
LFFDVARIINEKRPKAFLLENVKNLHSHDKGRTFEVILRTLREDLGYQVFYKVIDGAHFV
PQHRERIIIVGFRDPVIFDWSMVDLPEKGEHRLEEILHKTKGEPKLEHDGDRFYDHANRK
VLDKYTLTDNLWLYLQNYKKKHQAAGNGFGFGLVTPDSVTRTLSARYYKDGSEILVSQGG
NKNPRRLTPRECARLMGFPDSFKIPVSDTRAYKQFGNSVVVPVMVAVARVMQPLIADATL
TQPSDILQPA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttttatcccgccggtgattttatgactctcacaacgttcgaccaacaagcc
gcgatcgattacatcaacgccgcgaaacttgcccggcctaccttggatttggctgagcac
ttcggtatcgcgaaacgcactctgcaacgctggaaaagcggagaggtcgctccaccggcg
catgttgtgggcgagctacagcgccttctgcaattcggcgctgtcaaaaagccagttggt
gacttcaagttcattgacctttttgccggcatcggaggaatccgaaatgcttttgaggcg
attggtggcgagtgcgtgttcacgagcgagtgggatggctacgctcagaagacctacctc
gaaaacttttcagatggacacccgctgaatggtgacatcacccagatcgaagcgcaggac
atcccggaccatgatgttctgttaggtggatttccctgccagccattttctatcgctggt
gtatccaagaagaatgcgcttggtcgcgctcacggttttaaagacgcaacgcagggcact
ttgttcttcgatgtggcccgcatcatcaatgaaaaaagaccaaaggcgtttctcctggaa
aacgtgaagaatcttcactcgcacgacaagggccgaacttttgaagtgatcctgcgcacg
ttgcgcgaagaccttggctatcaggttttctacaaagttatcgacggcgcccatttcgtt
cctcagcacagagagcggatcatcatcgtcggctttcgtgacccagtgatctttgactgg
agcatggttgacctcccagaaaaaggcgagcaccgccttgaggaaattcttcacaaaacc
aaaggggagcccaagctggagcacgatggcgatcgtttctacgatcacgccaatcgcaaa
gtgctggacaagtacacgcttacagacaacctttggctttaccttcaaaactacaagaag
aagcaccaggctgcagggaatgggtttggctttggattggtgacgcccgacagcgtcaca
cgcactctgtcagctaggtactacaaagacggttcagaaattttggtaagccaaggaggc
aataagaacccccgccgcctgacgccgcgtgagtgcgctcgtttgatgggctttccagac
tcattcaagattccggtttccgatacgcgggcctataagcagtttggcaactctgttgtc
gtgccggtgatggtggcagtggctcgcgtcatgcagccattgatcgcagatgccacgctg
acacagccctccgacatccttcaacctgcgtga
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