Hydrogenophaga sp. PAMC20947: E5678_17570
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Entry
E5678_17570 CDS
T05960
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyc03032
]
E5678_17570 (gyrB)
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_17570 (gyrB)
Enzymes [BR:
hyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E5678_17570 (gyrB)
DNA replication proteins [BR:
hyc03032
]
Prokaryotic type
DNA Topoisomerases
E5678_17570 (gyrB)
DNA repair and recombination proteins [BR:
hyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5678_17570 (gyrB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QCB47678
UniProt:
A0A4P7RCQ4
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Position
complement(3835655..3838285)
Genome browser
AA seq
876 aa
AA seq
DB search
MSDENKPAESDNTGEASTQSANFQPTIDSNQAGASEGYGEGAITILEGLEAVRKRPGMYI
GDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHSDNSISVTDNGRGIPTGVKMDDK
HEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSIMLRLIVRREGQMHQI
EFARGFVQNRILEMKNGVEISPMKLVGPTDKRGTEVHFLPDTEIFKENSDFHYDILAKRL
RELSFLNNGVRIRLKDERTGKEDDFSGAGGVRGFVEFINKGKTVLHPTPFYASGERPAET
YGGIPGTHIGVEVAMQWNSGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEEHE
FAKKAKVEVTGDDMREGLCCVMSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGKLLNDYL
QERPNDAKIICGKIVDAARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEIY
IVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGKA
GGEGANSDGKDDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIA
QPPLYKVKAGKEELYLKDGPALDTFLLRIALKDAKVSTGGANDTLLEGDTLGELARKHQV
AERVISRLSKFMDAEALRAMADGVSIKLDTVEEAEASAIAMQAKLRELSTTGVPAEVAGE
FDTRTDKPILRISRRHHGNVKSSIITQDFVHGADYGALSTAAETFRGLLGEGAKAMRGEG
DKQKEERVGDFRQAMQWLISEAERTTSRQRYKGLGEMNPAQLWETTMDPTVRRLLRVQID
DAIEADRVFTMLMGDEVEPRREFIEQNALRAGNIDV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaaaacaagcccgccgaatccgacaacaccggcgaagccagcacccaaagc
gccaacttccagcccacgatcgacagcaaccaggccggggcgagcgaaggttacggcgaa
ggcgcgatcacgatcctggaaggcctggaggcggtgcgcaagcgcccgggcatgtacatc
ggcgacacgtcagacggcaccggcctgcaccacctggtattcgaggtggtcgacaactcc
atcgacgaagcgctggccggccattgcgacgatatcgtcgtcaccatccattccgacaac
tcgatcagcgtgaccgacaacggccgcggcatccccactggcgtgaagatggacgacaag
cacgagcccaagcgctcggccgctgaaatcgcgctgaccgaactgcacgccggcggcaag
ttcaaccagaacagctacaaggtctcgggcggattgcacggcgtgggcgtgtcttgcgtg
aacgcgctgtcgatcatgctgcgcctcatcgtgcgccgcgaaggccagatgcaccagatc
gagttcgcgcgcggcttcgtgcaaaaccgcatcctggagatgaaaaacggcgttgaaatc
tcgccgatgaagctcgttggccctaccgacaagcgcggcaccgaagtgcacttcctgccc
gacaccgagatcttcaaagaaaacagcgatttccactacgacatcctggccaaacgcctg
cgcgagctgagctttttgaacaacggcgtgcgcatccgcttgaaggacgagcgcaccggc
aaagaagacgacttctcgggcgctggcggcgtgcgcggctttgtggagttcatcaacaag
ggcaagacggtgttgcaccccaccccgttctacgcctcgggcgagcgcccggccgaaacc
tacggcggcatccccggcacccacatcggcgtcgaagtggcgatgcagtggaacagcggc
tacaacgagcaggtgctctgtttcaccaacaacattccgcagcgcgacggtggaacgcac
ttgaccggcctgcgtgccgcgatgacgcgcgtcatcaacaagtacatcgaagagcacgag
ttcgccaaaaaagcgaaagtcgaagtcaccggcgacgacatgcgcgaaggcctctgctgc
gtgatgagcgtcaaagtgcctgagcccaaattctccagccagaccaaagacaaactggta
tcgagtgaagtccgcgcaccggtggaagacatcgtcggcaaactgctcaacgattacctg
caagagcgcccgaacgacgccaaaatcatctgcggcaagatcgttgatgctgcccgcgcc
cgcgaagccgcgcgcaaggcccgcgaaatgacgcgccgcaaaggcgtgctcgacggcatg
ggcctgcccggcaagctggccgactgccaggaaaaagaccccgccctgtgcgaaatctac
attgtcgagggtgactccgccggcggctccgccaagcaaggccgagaccgcaaattccag
gccatcctgcctttgcgcggcaagattctgaacgtggaaaaagcacgctatgaaaagctg
ctcacctccaatgaaattctcacgctgatcactgcgctgggtaccggcattggcaaggcg
ggcggcgagggcgccaacagcgacggcaaagacgatttcaacgtcgccaagctgcgctac
caccgcatcatcatcatgaccgacgccgacgttgacggcgcccacatccgcaccctgctg
ctcaccttcttctaccggcagatgcccgagctggttgagcgcggccacatctacattgcc
cagccaccgctctacaaagtgaaggccggcaaagaagagctgtacctgaaagacggcccg
gcgctcgataccttcttgctgcgcatcgcgctgaaagacgccaaagtttccactggcggc
gccaatgacaccttgctcgaaggcgacacgctgggcgaactggcgcgcaagcaccaggtg
gccgagcgcgtgatctcgcgtttgtccaagttcatggacgctgaagccctgcgcgccatg
gccgacggcgtgagcatcaagctcgacacggttgaagaagccgaagccagcgccattgcc
atgcaagccaagctgcgcgaactcagcaccaccggcgtgcccgctgaagtggccggcgaa
tttgatacccgcaccgacaagccgatactgcgcatcagccgccgccaccatggcaacgtg
aagagcagcatcatcacgcaagacttcgtgcacggtgccgactacggcgcactgtccacc
gccgccgaaaccttccgcggccttctgggcgaaggcgccaaggccatgcgcggcgaaggc
gacaaacagaaagaggagcgcgtgggcgacttccgccaggccatgcagtggctcatctcg
gaagccgagcgcaccaccagccgccagcgctacaagggtctgggcgaaatgaaccctgcc
caactctgggaaaccaccatggaccccaccgtgcgccgcttgctgcgcgtacagatcgac
gacgccatcgaagccgatcgtgtgttcacgatgctgatgggcgatgaagttgagccgcgc
cgggaattcattgagcagaatgccttgcgtgcggggaatatcgacgtctga
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