Hydrogenophaga sp. PAMC20947: E5678_17975
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Entry
E5678_17975 CDS
T05960
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00020
Citrate cycle (TCA cycle)
hyc00640
Propanoate metabolism
hyc00660
C5-Branched dibasic acid metabolism
hyc00720
Other carbon fixation pathways
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01120
Microbial metabolism in diverse environments
hyc01200
Carbon metabolism
Module
hyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E5678_17975 (sucC)
00640 Propanoate metabolism
E5678_17975 (sucC)
00660 C5-Branched dibasic acid metabolism
E5678_17975 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
E5678_17975 (sucC)
Enzymes [BR:
hyc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E5678_17975 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
QCB47754
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All DBs
Position
3928338..3929504
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AA seq
388 aa
AA seq
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MKIHEYQGKEILRQFGVPTPRGIAAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGV
KVAKSIDDVKRLAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYVSLVTDRATQK
VALIASSEGGMDIEEVAHSTPEKIITEMIDPLVGITTEQSKKVAAAIGLTGASVDQAVDI
FAKIYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDPNALFRHPDIVAYRDLDEEDA
AEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLYGAEPANFLDVGGGATPEKVTE
AFKIMLKNDKVKAIMVNIFGGIMKCDTIATGVITACKATNLSVPLVVRMKGTNEQLGKKM
LAESGLPIISADTMAEAAEKAVAAVNAA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcacgagtatcaaggcaaggaaatcttgcgtcagttcggcgtgcccactccc
cgtggtatcgctgctttcactgtgcaggaggccgttgaagccgcacaaaaactgggtggc
cccgtgtgggtggtgaaggcccagatccacgccggtggccgtggcaagggcggtggcgtc
aaggtggcgaagtcgattgacgacgtcaagcgcctggccggtgaaattctgggcatgcag
ctcaagacccaccagactggccctgaaggccagaaagtgcgtcgcctctacatcgaagac
ggcgccgacatcaagaacgaactgtatgtgtcgctggtcacagaccgcgccacgcaaaag
gtcgccctgatcgcttcgagcgaaggcggcatggacatcgaggaagtggcccattccacg
cccgagaaaatcatcaccgagatgatcgacccactggtcggcatcaccactgagcaatcg
aagaaagtcgcagcagccatcggcctgacgggcgcttctgtggaccaggctgttgacatc
ttcgccaagatctacaagtgctacatggacaccgacgcgtcgctggtggagatcaacccg
ctgaactgcgattccaagggcaacctgatggccctggacgcgaagttcaacttcgatccc
aacgcgctgttccgtcacccagatatcgttgcttaccgcgatctcgacgaagaagacgcg
gctgaaatcgaggcctccaaattcgacctggcttacatcagcctcgacggcaacatcggc
tgcctggtcaacggcgcaggcttggccatggccaccatggacaccatcaagttgtacggc
gccgagccagccaacttcctggacgtgggcggcggtgccacccccgagaaggtcaccgaa
gccttcaagatcatgctgaaaaacgacaaggtcaaggccatcatggtcaacatcttcggc
ggcatcatgaagtgcgacaccatcgccacgggcgtgatcacggcttgcaaggccaccaac
ctcagcgtgccactggtggtgcgcatgaagggcaccaacgagcagttgggcaagaagatg
ctggccgagtccggcctgcccatcatcagtgccgacaccatggccgaagccgctgaaaaa
gcggtcgccgcggtgaatgccgcctaa
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