Hydrogenophaga sp. PAMC20947: E5678_18750
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Entry
E5678_18750 CDS
T05960
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E5678_18750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyc02000
]
E5678_18750
Transporters [BR:
hyc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E5678_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
QCB47890
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All DBs
Position
4100337..4101635
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AA seq
432 aa
AA seq
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MSELAQAGALMALLFLLLGLGVWVALALIACGIAGLVFFTSAPAGLLFSTTIWSSTASWA
LTALPLFIWMGEILFRTSLAKDMFAGLGPWVNKLPGRLVHVNVLGCGIFAAVSGSSAATA
ATIGKISLPELKERGYDESIAIGSLAGAGTLGLLIPPSIVMIVYGVAAQVSIVKLFTAGI
LPGLLLMTLFSGYIAIWSMKNPKKVPQDLEDVSWVERFKRLRLLAPVVALIAGVIGSIYT
GVATATEAATIGVFGSLLIAALGGSLNKASFIASLTGAARTSCMITFILMGAAYLTSAMS
FTGLPGNVATWITSLGLSAYGLLAVLTVFFILLGCFLDGISIVVLTSAVLLPAVQAAGID
PLWFGIYLILVVEMAQITPPVGFNLFVIQGITGKNLMELSRMALPFFLLMVLATVLITLF
PQIVLVLPQSMK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttgcccaagccggcgcgctgatggcgctgctgtttctgttgctcggctta
ggggtctgggtcgcgttggccctgatcgcctgcggcattgccgggctggtgttcttcacc
tcggctcctgccgggctgctgttttcaaccaccatctggagctccaccgccagttgggcg
ctgaccgctttgcccttgttcatctggatgggcgaaattttgtttcgaaccagtctggcc
aaggacatgttcgccgggcttggcccgtgggtcaacaaactgccggggcgcctggtgcac
gtcaacgtgctgggttgcggcatcttcgccgccgtcagcggctcatcggcggccaccgcc
gccaccattgggaaaatttcgcttcccgagttgaaggagcggggctacgacgaaagcatc
gccatcggttctctggccggggcgggcacgctgggcctgctgattccgccctcgattgtc
atgatcgtctacggtgttgccgcgcaggtgtccatcgtcaaactgttcacggcgggcatc
ctgccgggcctgttgctgatgaccttgttttcgggctacatcgccatctggtccatgaaa
aaccccaaaaaggtgccccaggatctcgaagatgtttcatgggtggagcgcttcaagcgg
ttgcgcctgctggcccccgtggttgcgctgatcgctggcgtgatcggctccatttacacc
ggggttgccaccgcgaccgaagcggcgacgatcggggtcttcggctcgctgttgatcgcc
gccctgggcggctcgctcaacaaggcgtcattcattgccagcctgaccggtgcagcccgc
acgtcttgcatgatcaccttcatcctgatgggcgcggcctatctcaccagtgccatgagc
ttcaccggcttgcccggcaatgtggccacctggatcacgtctctgggcctgtccgcctac
ggcttgctggctgtgctgacggtcttctttattctgctcgggtgctttctggatggtatt
tccattgtcgttctgaccagcgccgttctgttgccggcggtgcaggccgcaggtatcgat
ccgctgtggttcggcatctacctgatcctggtcgttgagatggcacaaatcacgccgccg
gtgggtttcaacctgttcgtgatccagggcatcaccgggaaaaacctgatggaactcagc
cgcatggcgttgcccttcttcctgttgatggtgttggccacggtgttgatcacgctcttc
ccgcaaatcgtgctggtccttcctcaatcgatgaaatga
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