Hydrogenophaga sp. PAMC20947: E5678_19235
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Entry
E5678_19235 CDS
T05960
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00061
Fatty acid biosynthesis
hyc00071
Fatty acid degradation
hyc01100
Metabolic pathways
hyc01212
Fatty acid metabolism
hyc02024
Quorum sensing
hyc04146
Peroxisome
Module
hyc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E5678_19235
00071 Fatty acid degradation
E5678_19235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E5678_19235
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5678_19235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyc01004
]
E5678_19235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyc04147
]
E5678_19235
Enzymes [BR:
hyc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E5678_19235
Lipid biosynthesis proteins [BR:
hyc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E5678_19235
Exosome [BR:
hyc04147
]
Exosomal proteins
Exosomal proteins of breast milk
E5678_19235
Exosomal proteins of breast cancer cells
E5678_19235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1576
AMP-binding_C_2
LPD22
Motif
Other DBs
NCBI-ProteinID:
QCB47975
UniProt:
A0A4P7RES8
LinkDB
All DBs
Position
4218019..4219707
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AA seq
562 aa
AA seq
DB search
MTASTADRPWLASYSPGVPADIDVEQYPSLVHLLEESFQKYASRTAYSFMGKDISYAQVD
SLSQAFAAYLQGLGLVKGDRVAIMMPNVPQYPVAVAGILRAGFVVVNVNPLYTARELEHQ
LKDSGAKAIVIIENFAATLEQCISKTPLKHVVLAAMGDQLGLLKGAIVNYVVRNVKKMVP
TFSLPQAVRFNDAIARGTRGTLKRPDIKPDDVAVLQYTGGTTGVSKGAVLLQRNVIANAL
QSEAWNEPVMKQVPAGEQPTSICALPLYHIFAFTVNMMLGMRIGGKVILIPNPRDMPAVL
KELSKQRFHSFPAVNTLFNGLANHPDIDTVDWSHLKVSVGGGMAVQGAVAKLWLEKTGCP
ICEGYGLSETSPSVSCNPVTNTEFTGTIGLPLPNTWMKCIDDDGDEVALGQAGEIAIKGP
QVMAGYWQRPDETAKVMTADGYFKTGDIGVMDERGYFKIVDRKKDMVLVSGFNVYPNEIE
EVVADLPGVLECAVVGVADDKSGEAVKLVIVKKDDSLTEAAVRAFCKANLTGYKQPKVIE
FREDLPKTPVGKILRRELRDKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcgacggcagaccgcccctggctggcctcgtattcacctggcgtgcccgcc
gacatcgatgtcgagcaatacccttcgctggtgcacctgctggaagaaagtttccagaaa
tacgccagccgcacggcctacagcttcatgggcaaagacatcagctacgcccaggtcgac
agcctgtcccaggcatttgccgcctatttgcagggtctgggcctggtcaagggagaccgt
gtcgccatcatgatgcccaacgtgccgcagtaccctgtggccgtggcaggcatcttgcgc
gccggttttgtggtggtcaacgtcaacccgctgtacaccgcccgcgagctggagcaccag
ctcaaggactccggcgccaaggcgattgtcatcatcgagaatttcgcggccacgctggag
cagtgcatctcgaagacgcccctgaagcatgtggtgctggcggccatgggcgatcagctc
gggctgctgaagggtgcgatcgtcaactatgtggtgcgcaacgtcaaaaagatggtgccc
actttcagcctgccccaggcggtgcggttcaatgacgccatcgcgcgcggtacacgcggc
acgctcaagcggcccgacatcaagcccgacgatgtggcggtgctgcagtacaccgggggc
accacgggggtgtccaagggtgccgtattgctgcagcgcaatgtgatcgccaatgccttg
cagtcagaggcctggaacgagcccgtcatgaagcaggtgccggctggcgagcagcccacc
agcatttgcgctttgccgctttaccatattttcgcgttcacggtgaacatgatgctgggc
atgcgcataggcggcaaagtcattctgattcccaatcctcgcgacatgcctgccgtgctc
aaagagctgtccaagcagcgtttccacagctttccggcggtcaacacccttttcaacggc
ctggccaatcaccccgatatcgataccgtcgactggagccacctcaaagtttcggtgggc
ggcggcatggcggtgcagggcgccgtggccaaactctggctggaaaaaacgggttgccct
atctgcgaaggctacggcctgtctgagacgagcccgtcggtcagctgcaacccggtgacc
aacaccgagttcaccggcaccatcgggttgcctttgcccaacacctggatgaagtgcatc
gacgatgacggcgacgaagtggccctggggcaggctggagagatagcgatcaaggggccg
caagtgatggccggctactggcagcgcccggatgaaaccgccaaggtgatgaccgccgat
ggctacttcaagacgggcgacattggcgtcatggacgagcgcgggtacttcaaaattgtg
gaccgcaagaaagacatggtgctggtcagcgggttcaacgtttatcccaacgaaatcgag
gaggtggtcgctgatctgccgggtgtgctcgagtgcgcggtggtgggtgtggccgatgac
aaatcgggtgaggcggtcaagctggtgatcgtgaaaaaggacgactccctcacggaagcg
gcggtgcgcgctttctgcaaagccaacctcacaggctacaagcaacccaaggtgatcgag
ttccgggaggatctgcccaagaccccggtgggcaagatcttgcggcgcgaactgcgcgac
aagaagtaa
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