Hydrogenophaga sp. PAMC20947: E5678_20270
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Entry
E5678_20270 CDS
T05960
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyc03000
]
E5678_20270
Transcription factors [BR:
hyc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
E5678_20270
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
AT_hook
TetR_C_4
Motif
Other DBs
NCBI-ProteinID:
QCB48154
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Position
4449839..4450531
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AA seq
230 aa
AA seq
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MTNASPVETKPARPRGRPRKTADERDGGNRRRELLLAAAHLFRHQGFAATSTRDIAAAAG
MQAGSPFYHFENKQVLLAAVMQEGMHSALLRQAASLAPLTERHPAKDRLRALVRNHFEVL
LGDHSDFVPVMLYEWRALDATQMEAITALKDRYEAAWVPALQQLHASGHLAGDPGLVRLM
IFGAMNWSVQWYQVPSAARNSHANSIHQRHLATLDELTTTALMLFLKTPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcctccccggttgaaaccaagcccgcacgcccccggggtcgcccccgcaag
accgccgatgagcgcgacggtggcaatcgccgtcgcgaactcctgttggctgccgcacac
ctctttcgccaccagggttttgccgccaccagcacgcgcgacattgccgccgcagcgggc
atgcaggcggggtcgccgttttaccattttgagaacaagcaggtgctgcttgcggccgtg
atgcaggagggcatgcacagcgctttgctgcgccaggctgcgtcgttggcaccgctgacc
gagcgccacccggccaaggaccgtttgcgggcactggtgcgtaaccactttgaggttttg
ctgggcgaccacagtgattttgtcccggtgatgctctatgagtggcgggcgctggacgcc
acacaaatggaggcgatcaccgcgctcaaagaccggtacgaagcggcctgggtacctgcg
ctgcaacagctgcacgccagtggccacctggcgggtgaccccggcctggtgcgcttgatg
atcttcggcgccatgaactggtctgtgcagtggtaccaggtgccgagtgcagcgcggaat
tcccatgcaaattccatccaccagcgtcacctcgctacgctggatgagctgaccaccacc
gcgttgatgctctttctgaagacgcccgcatga
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