KEGG   Hydrogenophaga sp. PAMC20947: E5678_20465
Entry
E5678_20465       CDS       T05960                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hyc  Hydrogenophaga sp. PAMC20947
Pathway
hyc00470  D-Amino acid metabolism
hyc00550  Peptidoglycan biosynthesis
hyc01100  Metabolic pathways
hyc01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hyc00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    E5678_20465
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    E5678_20465
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    E5678_20465
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hyc01011]
    E5678_20465
Enzymes [BR:hyc01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     E5678_20465
Peptidoglycan biosynthesis and degradation proteins [BR:hyc01011]
 Precursor biosynthesis
  Amino acid ligase
   E5678_20465
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp ATPgrasp_ST TTL ATP-grasp_4 RimK GARS_A
Other DBs
NCBI-ProteinID: QCB48187
LinkDB
Position
4491847..4492830
AA seq 327 aa
MNTNQLNLPAVDPKAMGKVAVLLGGRSAEREVSLMSGNGVLTALRAKGVDAHPFDPAARE
LSELKHEGFDRCFIALHGRFGEDGTVQGALELMGIPYTGPGVMASSVAMDKLMTKRIWIA
EGLSTPAWRQVRSAADTRAAFADLGSPMIVKPVREGSTIGLTKVTTLEQCEAAYALASLQ
DPMVMCEQFIAGDEVTCPVLGTGDQARALPVIRIVAPDGNYDYQNKYFTDDTQYLVPCGL
PEGEEERIQALVLKAFLTLDCRGWSRADVMIDATTRQPYLLEINTSPGMTGHSLVPMSAR
AAGLSYEDLCLSLLAGALLDNAVSTHG
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaacacaaaccaactgaaccttcccgctgtcgatcccaaggccatgggcaaagtggcc
gtcctcctgggcggccgctcggccgagcgcgaggtctccttgatgtcgggcaacggtgtc
ctgacggcgctgcgggccaagggcgtcgacgcacacccgtttgatccggccgcacgcgag
ttgagcgaactcaagcatgaaggttttgaccggtgttttatcgccttgcatggccgattc
ggcgaagacggcacggtgcaaggagcgcttgagctgatgggcattccctacaccggccct
ggtgtcatggcctccagcgtggccatggacaagctcatgaccaagcgcatctggatcgcc
gaaggcctgtccactcccgcctggcggcaggtcaggagtgcagcagatacccgcgcggct
ttcgctgatctcggatcgcccatgatcgtcaagccggtgcgcgagggttcaaccatcggg
ctcaccaaagtgaccacgctggagcaatgtgaagcggcctatgcgctggcctcgctgcaa
gatcccatggtgatgtgcgagcagttcatcgcaggcgacgaagtgacttgcccggtgctg
ggcacgggtgaccaggcgcgtgccttgcctgtgatccgcatcgtggcgcctgacggcaac
tacgactaccagaacaaatacttcaccgacgacacccagtacctcgtgccctgcggattg
cccgagggcgaagaagagcgcatccaggcgctggtcctgaaagccttcctcacgctggat
tgccgtggctggtcgcgtgccgacgtgatgatcgacgccaccacccgccagccctacctg
ctggaaatcaacacctcgcccggcatgaccggccattcgttggtgccgatgtcggcgcgc
gcggctggcctgtcttacgaagacctgtgtttgtccctgttggccggcgcattgctggac
aacgctgtttccacgcacggctaa

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