Hydrogenophaga sp. PAMC20947: E5678_21775
Help
Entry
E5678_21775 CDS
T05960
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E5678_21775 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyc01007
]
E5678_21775 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyc03016
]
E5678_21775 (lysS)
Enzymes [BR:
hyc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
E5678_21775 (lysS)
Amino acid related enzymes [BR:
hyc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E5678_21775 (lysS)
Transfer RNA biogenesis [BR:
hyc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E5678_21775 (lysS)
Prokaryotic type
Other AARSs
E5678_21775 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCB48426
UniProt:
A0A4P7RE18
LinkDB
All DBs
Position
4767592..4769145
Genome browser
AA seq
517 aa
AA seq
DB search
MTQAPTPTAQPVAVDENQLIAERREKLKALREVQRQGGAVAFPNDFKPADKAAALFATHG
EATKEALEATPVRASVAGRMMLKRVMGKASFATLQDASLGESGGRIQIYLNNESVGEAVH
AGFKHWDLGDIVAAEGVLFKTRTGELTIHADNIRLLTKSLRPLPDKFHGINDQEIKYRQR
YVDLMTDEVSRRRFVTRSKTLSCIREFMVSHAFLEVETPMLHPIPGGAIAKPFETHHNAL
DQAMFLRIAPELYLKRLLVGGFDRVFEINRSFRNEGISVRHNPEFTMMEFYAAYWNYQDL
MDFNEQLIRHVVLQVHGDTPLSYNGKPVDVMAPFERLTIREAILKYTDAGDGVDQPEWLL
PQLKKLGLSEAKHQLSGRSLSSLQVLYFEETVEEKLWNPTFIMDHPTEISPLARANDANP
EVTERFELYITGREFGNAFSELNDAEDQAARFHAQVASKEGGDDEAMHFDADFIRALEYG
MPPAGGCGIGIDRLMMLLTDSPSIRDVILFPALRREA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagcacccactcccaccgcccaacctgttgccgttgacgaaaaccagctcatt
gccgagcgccgcgaaaagctcaaggctttgcgtgaagtgcagcggcagggaggggcggtt
gcattccccaacgatttcaagccagccgacaaggccgcagccctgttcgcgacccacggc
gaggccaccaaggaagcgctggaagccacgccggtgcgcgccagtgtcgctggccggatg
atgctcaagcgcgtgatgggcaaggccagctttgccactttgcaagacgcctctctgggt
gagagcggtggccgcatccagatttacctgaacaatgaaagcgttggcgaagcggtgcac
gcggggttcaagcactgggacctgggcgatatcgtggcggccgaaggcgtgctgttcaaa
acccgcaccggtgagctcaccatccacgccgacaacatccggctgttgaccaaaagcctg
cggccgctgcccgacaagttccacggtatcaacgaccaggagatcaaataccgccagcgt
tatgtggatctgatgaccgacgaggtttcgcgccgccgttttgtgacgcgcagcaaaacc
ctttcctgcatccgcgaattcatggtgagccatgccttcctggaagtcgagacccccatg
ctgcacccgatcccgggtggtgccatcgccaagcccttcgagacgcaccacaacgcgctt
gatcaggccatgttcctgcgcatcgcgcccgagctgtacctgaagcgattgctggtgggc
ggcttcgatcgcgtgttcgaaatcaaccgcagcttccgcaacgaaggcatcagcgttcgc
cacaaccccgagttcaccatgatggagttctacgcggcgtactggaactaccaggacctg
atggacttcaacgagcagctgatccgccatgtggtgcttcaggtgcatggcgacacgccg
ctgagttacaacggaaagcctgtcgatgtgatggcgccttttgagcgcctgaccattcgc
gaagcgatcctgaagtacaccgatgccggcgacggtgtggaccagcccgaatggctgctg
ccccagctcaagaagctgggcctttcggaggccaaacaccaactgagcggccgcagcctg
tccagcctgcaggtgttgtactttgaagagacggtggaagaaaagctgtggaatcccact
ttcatcatggaccaccccaccgagatctcgccactggcacgggccaacgacgcgaacccg
gaggtgaccgagcgcttcgagctgtacatcaccggccgcgagtttggcaatgccttttcg
gagctgaacgacgccgaagaccaggccgcccgcttccacgcccaggtggccagcaaagaa
ggcggtgatgacgaggccatgcattttgatgccgacttcatccgcgccctggaatacggc
atgccacccgccggtggttgcggcatcggtatcgaccgcctgatgatgttgctgaccgac
agccccagcatccgcgacgtgatcttgttcccggcactgcgccgcgaagcctga
DBGET
integrated database retrieval system
