Hydrogenophaga sp. PAMC20947: E5678_21785
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Entry
E5678_21785 CDS
T05960
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyc03021
]
E5678_21785 (rpoH)
Transcription machinery [BR:
hyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E5678_21785 (rpoH)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TFIIS_M
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QCB48428
UniProt:
A0A4P7REK6
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All DBs
Position
complement(4770283..4771239)
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AA seq
318 aa
AA seq
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MSAALATTALPTASLAVGSPWASRSLTLPPLGNLDAYISAVNRMPMLTLEEEQSAARRLR
DDNDIDAAGQLVLSHLRLVVSIARQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLV
SYAMHWIKAEIHEYVLKNWRMVKMATTKAQRKLFFNLRSKKQGFRSEALDGDTHREAFSD
DEVSIVARDLNVKPEEVREMEMRLSGGDVVLDPGPGDDSEDRFGPIAFLTDSAHEPTAML
ESAQRDLLASEGIAQALVALDDRSRRIVSERWLKVNDDGSGGMTLHELAAVYGVSAERVR
QIEVAAMKKMRKTLAEYA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgcacttgccaccaccgctttgccgaccgcctcactggccgttgggagcccg
tgggcgagccggtcgctcaccctgccgcccctgggcaaccttgacgcctatatttctgcg
gtgaaccgcatgcctatgctcacgcttgaggaagagcaaagcgccgcccgccgcctgcgc
gacgacaacgacatcgacgctgcgggtcagttggtgctgtctcacctgcgcctggtggtg
tccatcgcccgccaatacctgggttacggcctgccccatggcgacctgatccaggaaggc
aacgttggcctgatgaaagcagtcaagcgcttcgaccccgatcagggcgtgcgcctggtg
agctatgccatgcactggatcaaggccgagattcacgaatacgtgctgaagaactggcgc
atggtcaaaatggccaccaccaaggcccagcgcaagctcttcttcaatctgcgctccaag
aaacaaggcttccgttcggaagcgctcgatggcgacacccaccgcgaggccttctcggac
gatgaggtcagcatcgtcgcgcgcgacctcaacgtcaagcctgaagaagtgcgcgaaatg
gaaatgcgcctctccggtggcgacgtggtgcttgatcccggtccgggcgacgacagcgaa
gaccgcttcggccccatcgccttcctgaccgattcggcccacgagcccacagccatgctc
gagtcggcccagcgagacctgctggccagcgaaggcattgcccaggccttggttgcgctg
gacgaccgctcgcgccgcatcgtctccgagcgctggctcaaggtcaacgacgacggctcg
ggtggcatgacgctgcacgagctggccgccgtatatggcgtgagtgccgagcgcgtgcgc
cagatcgaagtggcggccatgaagaaaatgcgcaagacactggccgaatacgcctga
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