Hymenobacter sp. DG25B: PK28_00890
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Entry
PK28_00890 CDS
T03500
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PK28_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Por_Secre_tail
Big_9
Big_13
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
AIZ62597
UniProt:
A0A0A7LLU1
LinkDB
All DBs
Position
complement(196006..202200)
Genome browser
AA seq
2064 aa
AA seq
DB search
MALVPLGVQGQARTRDSITDTEPTVATKSLKRKQLPVSLAVAAACATTTTLNFATRPTNE
DWKNHAPVNAGGGSTNTTISTAGSYVEPAGSTQTNLYVTPVNGVNALYWDADYTSTAEVT
TQITYSFNRPVNNLSLRIQDIDLGAQAWVDKVTFTATQADGTVLNLSSTVDATVARDAAY
ISLSGNSLQGLQNVASNSTLGNATVTFNKPIVSFKITYQNVITGVADPLGQYIAIDYMTW
CTQANVATTLAGPNHAKAGSTVTYTATTTASGDYAATGVQPKVQFTPGTVLATYPTGSTY
VQATGVLTLPIIANLAIGASSTSTITYVMPATTVNGTASSTISTDDADPLDNNGSAATAK
VTTVVNTPPVPTALSSTTPRAVYTQLSPLAATDANGDAISTYTITPASLTSLNTSGKLYV
KSGSTYTEVTAGNYPGLVLSAAQAASLYFLPNSTASVGTVSFSYNATDSQGDISTTTAAY
SLAITNSAPVAAATTYSGAAIYSTDGQKAITALQASDADGTIATYQIASLPTDGTLYYNT
NADGTSGTYVAVASANLNALNLSPAQAASLRFDPSGLASGNISFTFTAKDNNGQVSNTAT
YTIPVASSIAPVAANTTNSGTILSSAGQTTINSLKASDADGSIATYQIGSLPTDGTLFYN
TNTDGVSGAYVAFTSANIGTVTLTPAQAASLKFDPSGAFNGNVTFTFTAKDNVGNLSNVA
TYTVPVSNVAPVAADVTMTTAQAIPGANGPTAIPALTATDPDGTVASYQISALPGSGTLY
YNTAADGTSGTYVAMTSTMVNGGASQLNLTAQQAASLKYDPSGTTNSNVTFTYTATDNNG
TVDATPATYTITLGNQAPRAISATNSTLITSTKNDAYRLNWTAPNGTLSGSDADGTIASF
TITGGLPNATTQGVLTYSTNNLGANVGRNNNGLVTITAGTVIPAGAYLYFNPVDNTTTTT
LTLQFKATDNSGLASANTATYTVPVNQTIAEPVANNVTNSPAIVSSANATAITAFSGSLN
GNVSLYSYIIRTIPDADTQGTLYVNGVAVTAPEFELPAADASKLTFDPIGTSNATVTFTY
TVRANSATGPIDTTPATYTITLGNAAPVAATVSNSLSSPIASSAGQTAISSLIATDADGS
ISTYQIKSLPADGTLFYNTNTDGVSGAYVALTSANIGTVTLTPAQAAKLKYDPSGAFGGT
VTFTYAATDNQSAVSNTATYSILVSDVDKEAVYTVATAKNVDSYTTGASLATVTDADGAL
TSAVLANGSTLPAGVALNATTGQFTVSNAGSLVAGSYPLTINTVDATGGKSSSTITLTFT
ADKEAVYSAPNNYNQDALSNGFSLATVTDADGTLTAAAIATGTLPAGMSFNSTTGQFAVS
NTTQLVANAYTFTVNTTDATGGKSTVPVTITINADREAVYTVVGAKNVDSYTTGASLATV
NDADGTLTSAVLANGSTLPAGVAFSSTTGQFTVANAALLVAGSYPLTLTTTDVVGGTTTQ
TITLTFTADKEAVYSSSNTYNQDALSNGFSLATVTDADGALASAAIASGTLPSGMAFNTT
TGQFTVSGNTAPAAGTYNFTVNTVDAAGGKSTVPVSIIISTDREAVYTVAPAKNVKSYST
NQSLATVTDADGAIVAAVPVGALPAGVALDAATGQLTVADAALLVAGTYTFQVSTTDALG
GVTSHTVTLVFNGDADAVYTTTNTYNRDALSDGYSLASVTDTNGGVASASITTGTLPAGM
AFNSTTGQFTVTGSTAPVAGTYTFRVNTVDAQGGKTTNTVTIIINEDTEAAYSVGNSYNK
SSLKDNQELATVTDQDAALASVALAAGSTLPTWLRLNTATGTITIPVAANAAAGVYNATM
NTVDAQGGKSVTTVSITVTIPPLPVELTTFDVKAVRTNAQLTWHTAIEKNNDHYEVERSF
DGLTFLQIGQVRGNGSSSTGHDYAFTDVNVGQRTGTVYYRLRQVDTDGKLHVTPVRTVTF
AASAISISVYPNPAVTQATVDLGTLPGGTYQVQVLDMTGRVVRQLTLQGGMAQPLDIRSL
AEGTYQVLIRNNEVNLTQKLVKRN
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atggctttggtgcccttgggagtgcagggccaggcccggacccgggattccataaccgat
acggaacctacggttgcaaccaaatccctcaagcgtaagcaactgcccgtctctttggca
gtagcggccgcttgtgccaccaccaccacgctcaatttcgccacccgcccaacgaatgag
gattggaaaaaccacgcgcccgtgaatgcgggcgggggctctaccaacactaccatcagc
acggcgggttcctacgtagagccagccgggagtacgcaaaccaacctgtatgtaacgccc
gttaacggggtgaatgccttatactgggatgcggattacaccagtacggcagaagtaacc
acacaaatcacctactccttcaaccggccggtcaataacctttctctccggattcaggat
attgacctgggggctcaggcctgggtggataaagtcactttcactgcgacgcaagcggat
ggtacggtgctgaacctgtcttcgacagtggatgccaccgtagcgcgcgatgccgcctac
atttccctgagtggcaacagcctgcaggggctgcagaacgtagcttccaactcaacgctg
ggcaatgctaccgttacgttcaacaagcccattgtttccttcaagattacctatcagaac
gtaattaccggagttgcggatccgcttgggcagtacattgccattgactatatgacgtgg
tgcacccaggctaacgtggcaacgaccttagctgggccgaaccacgccaaggcaggttcc
accgtaacgtacaccgccaccactaccgccagcggcgactatgccgctaccggcgtgcag
cccaaggtgcagtttaccccgggcactgtgctggccacttacccaacgggcagcacttat
gtgcaagcaacgggagtattaacgctgcccatcattgctaacctggccattggggccagc
agcacctccaccattacctacgtaatgccggccactactgtgaacggtacggccagcagc
actatcagcaccgacgacgccgacccgctggataacaacggctctgcggccacggccaag
gtgacaaccgtggtcaatacgccacccgttcccacagcgctgagctctaccacgccccgc
gccgtgtacacgcagctgtcgcccctggccgctaccgatgccaacggggatgctatcagc
acctacaccatcacgccggccagcctcacttcgctgaatacctccggcaagctgtacgtc
aagtcgggttctacttacacagaagttaccgctggaaactatcctggtctggtgctgagc
gctgcccaggcggcctcactgtactttttgccaaacagcacggccagtgttggtaccgtt
agcttcagctacaacgccaccgattcgcagggagatatcagcaccacaacggcggcctat
tcgctggccatcacaaacagtgcacccgtagccgctgccaccacctattcgggggcagct
atttatagcactgatgggcagaaggccattacagcgctgcaggcttcggatgccgatggc
accattgccacttaccagattgccagcctgcccacggatggcaccctatactacaacacc
aatgccgatggcaccagcggtacgtatgtagccgttgccagcgctaatctgaatgccctg
aacctgagcccggcgcaggccgcctcgctgcgtttcgatccttccggtttggccagcggc
aacatcagcttcacgttcactgccaaagacaataatggccaggtgagcaacacggctacc
tataccattccggtagccagctctattgccccggtagctgccaacaccaccaactcgggt
actatcctgagcagtgccgggcaaaccactatcaacagcctgaaagccagtgatgcggac
ggctcaattgccacttatcagattggcagtctgcctacggacggcacgctgttttacaac
accaatacagatggtgtcagcggcgcttatgtagcctttaccagcgctaatattgggacg
gtaaccctgactccggcacaggcggcttcgttgaagttcgacccttcgggcgcctttaat
ggcaacgtgacgtttacgttcacggccaaggataacgtgggtaacctctcaaacgtggct
acctatacggtgcccgtaagcaacgtggccccggtagccgccgacgtgacgatgacgacg
gcccaggctattcctggcgcaaatggccccacggctattccggccctgacggctacggat
ccggacggcactgttgcttcgtaccagatttcggcgctgcccggcagcggcacgctctac
tacaacacggccgccgatggtacctccggcacctatgtggccatgactagcaccatggta
aatggcggggcgtcccagttgaacctgaccgcccaacaggccgcttcgctgaaatacgac
ccctcgggcaccacgaatagcaacgtcaccttcacttacacagccactgacaacaatggc
accgtggatgctacgcccgctacttacactattacacttggcaaccaggccccgcgcgcc
atttccgctacaaacagcacgcttatcactagcacgaaaaacgatgcataccggttgaac
tggactgcaccgaatggtacgctgtccggctcggatgcggacggtaccattgcttccttc
acgattaccggcggcctgccaaacgccacaacgcagggggtactaacctactccaccaat
aacctgggagccaatgtgggtcgcaacaacaacggtttggtaactattaccgcgggtact
gttattccagcgggtgcctatctgtacttcaacccggttgacaacaccactactactacc
ctcaccctgcagtttaaagctaccgacaacagcggcttggctagtgctaatacggctacc
tacaccgtaccggtaaaccagactattgccgagccggttgccaacaatgtgaccaactcg
ccggctattgtcagcagtgccaatgccacggccattacggccttctcgggctcgttgaat
gggaatgtgtcgctctacagctacattatccgcactattccggatgccgatacccagggt
acgctgtacgtgaatggagtggccgtaaccgctcccgagtttgagctgccggcagccgat
gccagcaagctaaccttcgaccccattggcaccagcaatgccacggtaacctttacctat
accgtgcgcgctaacagcgccaccggccccatcgacaccacgccggctacttataccatc
acgctgggcaacgcggccccggtggcagcaaccgtgagtaactcactgagcagccctatt
gccagctcggccggtcaaacggctatcagctcactgattgcaacggatgcggacggctca
atttccacctaccagatcaagagcctgcccgcggacggcacgctgttttacaacaccaat
actgatggtgtcagcggcgcttatgtagccctgaccagcgctaatatcgggacggtaacc
ctgactccggcgcaggcagccaaactgaagtatgacccctcgggtgcttttggtggcacc
gtaacgttcacttacgcagctactgataaccaaagtgccgtatcgaacactgctacctat
tctattctggtatcagatgtagacaaagaagccgtgtacacggtagcaactgctaaaaac
gtcgacagctatactaccggtgcttctttggccacggtaacggatgccgatggtgctttg
acgtcagctgtattggccaatggcagcaccctgcccgccggcgtagccctcaatgctacc
acgggtcagttcaccgtatctaacgcgggtagcttggttgcgggctcgtacccactgacg
attaacacggtagatgccactggcgggaaatcgtccagtaccatcacgctgactttcacg
gctgataaggaagccgtgtattcggccccgaacaactacaaccaggatgcactgagcaac
ggcttctccctggccacggtaacggatgccgatgggacactcactgcggcggctattgcc
acgggcacgctacccgccggcatgagcttcaatagcaccacaggtcagtttgccgtcagc
aacacgacccaattagtcgccaacgcttacaccttcacggtgaatacgacggacgctaca
ggtggaaaatccacggttccggtaaccattaccatcaatgcggaccgcgaagcagtctac
acggtagtgggagcgaagaatgtggatagctacacgactggtgcttctttggccacggta
aacgatgcagatggcacgctaacctcagcggtgctggccaatggtagcaccctgcccgcc
ggcgtcgccttcagctcgaccacgggtcagtttacggtggcgaatgcggcgcttttggtg
gccggttcctacccgctgacgttgacaaccacggatgtggtgggcggcacaaccacgcag
accatcacgctgactttcacggctgataaagaagccgtgtattcatcatccaacacctac
aaccaggatgcactgagcaacggcttctccctggccacggtaacggatgcggacggtgca
cttgcctcggcagctattgccagtggtacgttgccttcgggcatggccttcaataccacg
acgggacagtttaccgtgagcggcaacaccgcgccggccgctggcacctacaacttcacc
gtgaatacggtggatgctgcgggtggtaagtcgacggtgcccgtgagcatcattatctcc
actgaccgcgaggcagtatatacggtagctcccgcgaaaaacgtgaaaagctactcgacc
aaccagagtctggctacagtgacggatgccgacggagccattgttgcggcggtgcccgtg
ggtgccttgccggctggtgtggctctggatgccgctaccggtcagctgacggtagcagat
gctgccctgctggtggccggcacctacaccttccaggtaagcacaaccgatgccttgggt
ggggtaacttcccatacagtaacgctggtcttcaacggggatgctgatgcggtgtacacg
acaaccaatacctataaccgggatgcgctcagcgacgggtattccctggcctcggtaacg
gataccaatggcggggtagccagtgccagcattactacgggcacgctgcccgccggcatg
gctttcaactccaccacgggccagttcacggtaactggttctaccgcaccagttgctggc
acctacaccttccgggtgaatacggtagatgcgcagggtggcaaaacgaccaatacggtg
actatcatcatcaacgaggatacagaagcagcttactcagtaggcaactcctacaataaa
agctcgctgaaggataatcaggagctggctactgtaacggatcaggatgctgctcttgcc
tcagttgctctggcagctggcagcacactgcccacctggctgcggttgaataccgccacc
ggcaccattaccattccggtagcagccaatgcagcggcgggggtatacaacgctactatg
aatacggtagacgcacagggcgggaaatcggtaacgacggtgagcattaccgttaccatt
cccccactgcccgtagagctgaccacgtttgacgtgaaagccgtacgcaccaatgcccag
ctgacttggcatacggctattgagaaaaacaacgaccactatgaagtagaacgtagcttc
gatggcctcaccttcctgcagattgggcaggtacgcggcaacggtagcagctccactggt
catgactatgccttcacggatgtaaacgtaggccagcggaccggcacggtgtactaccgc
ctgcggcaggtagataccgatggcaagctgcacgtaacgcccgtgcgcacggtaaccttc
gccgccagcgctatcagcatcagtgtgtatccgaacccggcggtaacccaggctactgtg
gacctgggtacactaccgggcggcacttaccaggtgcaggtgctggacatgacgggccgc
gtggttcgccagctcaccctgcagggcggcatggcccagcccctggatatccgcagcctg
gcggagggtacctaccaagtattgattcgcaacaatgaagtgaatctgactcaaaagctg
gtgaagagaaactag
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