Hymenobacter sp. DG25B: PK28_01835
Help
Entry
PK28_01835 CDS
T03500
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyd03016
]
PK28_01835
03036 Chromosome and associated proteins [BR:
hyd03036
]
PK28_01835
Transfer RNA biogenesis [BR:
hyd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PK28_01835
Prokaryotic type
PK28_01835
Chromosome and associated proteins [BR:
hyd03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PK28_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
Pyr_redox
FAD_binding_2
AlaDh_PNT_C
HI0933_like
DAO
UDPG_MGDP_dh_N
NAD_binding_8
Lycopene_cycl
Thi4
Pyr_redox_3
DUF4315
Motif
Other DBs
NCBI-ProteinID:
AIZ62732
LinkDB
All DBs
Position
410832..412700
Genome browser
AA seq
622 aa
AA seq
DB search
MFQQEEYDVIVVGAGHAGCEAAAAAANLGSKVLLVTMNMNTIAQMSCNPAMGGVAKGQIV
REVDALGGQSGIITDKTMIQFRMLNRSKGPAMWSPRAQSDRMRFAEEWRMTLEQTPNVDF
WQEAVTGLVVENETVVGVKTALGIEFRGKSVVLTNGTFLNGLIHIGEKQFGGGRAAEKGS
TGITEQLLELGFEAGRMKTGTPPRVDGRSLDYSKMEAQPGDEVPSKFSYLDTPYLSKQRP
CYITYTNPEVHEILKEGFEKSPMFQGRIKGLGPRYCPSVEDKINRFADKDRHQIFVEPEG
WSTVEVYVNGFSSSLPEDVQYRALRKIAGFENAKMFRPGYAIEYDFFPPTQLQLTLETKR
IKNLYFAGQINGTTGYEEAACQGLMAGINAHNRVHGKEPFILKRSEAYIGVLIDDLVNKG
TDEPYRMFTSRAEHRILLRQDNADLRLTPLGYALGLASEERMELVRQKERETAEIIELLQ
QHAIEPQEINGLLEELGSATISEKTRAVNLLRRPNMELADLTRTLPNLTLALAPFRADSL
EQAIIRIKYETYIEKEHQQAGRMQELENFVIQGRLDYQQMPALSYEAREKLLRVQPETIG
QAARISGVTPADISVLMVYLGK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcaagaagaatacgatgttattgtagtaggagccggccacgccgggtgtgag
gccgctgccgctgccgccaacctggggtccaaggtgctgctggtaacgatgaacatgaac
accattgcgcagatgtcgtgcaacccggccatgggcggggtggccaaaggacagattgtg
cgcgaggtggacgcgctgggcgggcagtcgggcatcatcaccgacaaaaccatgattcag
ttccggatgctgaaccgctccaaaggccccgccatgtggagcccgcgcgcgcaaagtgac
cggatgcgctttgctgaagagtggcgcatgacgctggaacaaacccccaacgtggatttc
tggcaggaagccgtaaccggcctggtagtagaaaacgaaaccgtagtaggcgtgaaaacc
gcgctgggtatcgagttccggggcaaatcggtggtgctcaccaacggaaccttcctgaac
ggtctcatccatattggcgagaagcagttcggtgggggccgcgccgccgaaaaaggcagc
accggcattaccgagcagcttcttgagctgggctttgaagccggccgcatgaaaaccggc
accccgccccgcgtggatggccgctcgctggactacagcaaaatggaggcgcaacccggc
gacgaagtgccgagcaaattctcctacctcgatacgccctacctcagtaagcagcgcccc
tgctacattacctacaccaaccccgaggtgcacgaaatcctgaaagagggtttcgagaag
tcgccgatgttccagggccgcattaagggcctggggccgcgctattgcccttcggtggag
gataagatcaaccgcttcgcggataaagaccgccaccagatttttgtggagcccgaaggc
tggagcacggtggaggtgtacgtaaacggctttagctcctccctgcccgaggacgtgcag
taccgcgctctgcgcaaaattgccggcttcgaaaacgcgaagatgttccgcccgggctac
gccattgagtacgacttcttcccgcccacccagctgcagcttacgctggaaaccaagcga
atcaaaaacctgtatttcgcgggccagatcaacggcaccacgggctatgaggaagctgcc
tgccagggtttgatggccggtatcaacgcccacaaccgggtgcacggcaaggagcccttc
atcctgaagcggagcgaagcctacattggcgtgctcattgatgacctggtaaacaaaggc
accgacgagccctaccgcatgttcacgagccgcgccgagcaccgcattctgctgcgccag
gacaacgctgacctgcgcctgacgccactgggctacgccctggggctggcctcggaagag
cgcatggagctggtgcgccagaaggagcgcgaaaccgccgaaatcattgaattgctgcaa
cagcacgccattgagccccaggaaataaacggactgctggaagagttgggctcggctacc
atcagcgagaaaacccgcgccgtgaacctgctgcgccggcccaacatggagctggccgac
ctcacgcgcaccttgcccaacctcacgctggccctggcccctttccgggccgacagcctg
gagcaggccattatccgcatcaagtacgaaacctacattgaaaaggaacaccagcaggcc
ggccgcatgcaggagctggaaaacttcgtgattcagggccgcctggactaccagcaaatg
ccggcgctttcctacgaggcccgcgaaaagctgctgcgcgtgcagcccgaaaccattggc
caggccgcccgcatcagtggcgttacgcccgccgatatttcagtattgatggtgtacctg
gggaaataa
DBGET
integrated database retrieval system
