Hymenobacter sp. DG25B: PK28_04085
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Entry
PK28_04085 CDS
T03500
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PK28_04085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyd02000
]
PK28_04085
Enzymes [BR:
hyd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PK28_04085
Transporters [BR:
hyd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PK28_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA
nSTAND3
DEAD
AAA_29
AAA_25
RsgA_GTPase
Zeta_toxin
ABC_ATPase
AAA_18
AAA_24
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
AIZ63079
UniProt:
A0A0A7LIT0
LinkDB
All DBs
Position
complement(946100..947944)
Genome browser
AA seq
614 aa
AA seq
DB search
MKTYLRILQYARPYADFLPFYFLYTILGIIFSIGNFALIIPLLKVLFDKTGKVQMNAPDH
LPGFAPSLDYVTSTFNYFFAHVIATQGKMGALLFVCLVLVVSVFFSNVFRYLSLRLVARV
RARVIRNMRRALYHRVIQLQLGYFATGRKGDLMSRFTNDVQEVEGSVVNTLTAVIRDPLT
IVAFFAVLFYMSFKLTLFTLVLLPISGGIIASLAKRLRSQAKTSQSTLGSMLSVIDETLG
GIRVIKAFNAQDYIKDKFEQQNDLYAKTSRRIDNTRDLASPFSEFAGVLVVAGLIYFGGT
LILGGNSDLEGESFITYIVLFSQVLTPAKALSSAFGNIQRGLVAGERVLSIIDTEPVIRD
KADAQLLPAFEKEIELRNLQFTYGDQPVLQDINLIIPKGKTVALVGPSGGGKSTLADLLP
RFYDPTGGQLLIDGHDVRDCTIHSVRDQMGIVTQESILFNDTIFNNIRFNQTQATEEEVM
NAARIANAHEFIMSTPEGYQTIIGDRGTRLSGGQRQRLSIARAVLRNPPILILDEATSAL
DTESEKLVQEALMRLMQNRTSLVIAHRLSTVQHADEIVVLQHGRIVERGTHDELLQRGGL
YQRLSQMQTNVALA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctacctccgcattctgcagtacgcgcggccctacgccgattttctgcccttc
tactttctctacaccatcctgggcatcattttcagcattggcaactttgcgctgattatt
cccttgctgaaagtgctgtttgacaagacgggcaaggtgcagatgaatgcgccggaccac
ctccccggcttcgccccttctctcgattacgttaccagcaccttcaactacttcttcgcg
cacgttattgccacgcagggcaagatgggtgccctgctgtttgtgtgcctggtgctggtg
gtatcggtgttttttagcaacgtattccggtatctgagcttgcggctggtggcccgggtg
cgggcccgcgttatccgcaacatgcgccgggcgctctaccaccgcgtcattcagctgcag
ctgggctacttcgccaccggccgcaagggtgatttgatgtcgcgctttaccaacgacgtg
caggaagtggaaggctccgtggtgaataccctcacggccgtcattcgggacccactgact
attgtggccttcttcgcggtgctgttttacatgtcgtttaagctcacgctgtttacgctg
gtgctgctgcccatttccgggggaattattgccagcctggccaagcggctccgctctcag
gccaaaaccagccagagcacgctgggctccatgctttctgtgattgatgagacgctgggc
ggcatccgcgtgattaaggccttcaatgcccaggactacatcaaggacaagtttgagcag
cagaacgacctgtacgccaaaacctcgcgccgcattgataacacccgggacctcgcttcc
cccttctccgagtttgccggggtgctggtagtagccggcctgatttactttggcggcacc
ctcattctgggtggcaattccgatctggaaggcgaatcgttcatcacctatatcgtgctg
ttttcgcaggtactcacgccggccaaagcgctgtcgtcggcgtttggcaacattcagcgc
ggcctggtggccggcgagcgggtgctgagcattattgatacggagccggtgattcgggac
aaggccgatgcgcagttgctgcccgcttttgagaaggaaatcgagctgcgcaacctgcag
ttcacctacggcgaccagcccgttttgcaggacatcaacctcattattccgaaaggcaaa
acggtggcgctggtgggcccctcgggcggtggcaaatcaaccctggccgatctactgccc
cgcttttacgaccccaccggcgggcaactcctgattgatggccacgatgtgcgcgactgc
accattcactccgtgcgcgaccagatgggcattgtaacccaggaaagcatcctgtttaac
gataccatcttcaacaacatccgcttcaaccagacccaggccaccgaagaggaagtgatg
aatgccgcccgcattgccaatgctcacgagttcattatgagcaccccggaaggctaccag
accatcatcggcgaccggggcacgcggctttcgggcgggcagcggcagcgcctgagcatt
gcacgcgccgtgctgcgcaacccacctattctcattctggatgaagctacttccgccctc
gataccgagagtgaaaagctggtgcaggaagcgctgatgcgcctgatgcagaaccgcact
tccctggttattgcccaccgcctgagcaccgtgcagcacgccgatgagattgtagtgctg
cagcacggccgcattgtggagcgcggcacccacgatgaattgctgcagcgcggcggcctt
taccagcgcctgagccagatgcaaaccaacgtggcgttagcctaa
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