Hymenobacter sp. DG25B: PK28_04365
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Entry
PK28_04365 CDS
T03500
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00550
Peptidoglycan biosynthesis
hyd01100
Metabolic pathways
hyd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PK28_04365
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PK28_04365
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyd01011
]
PK28_04365
Enzymes [BR:
hyd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PK28_04365
Peptidoglycan biosynthesis and degradation proteins [BR:
hyd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PK28_04365
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Gene cluster
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Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AIZ63115
UniProt:
A0A0A7LIP5
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Position
1009347..1011188
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AA seq
613 aa
AA seq
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MQYLEGRKYVVLAIFLAVASIFGARLFYIQVLDGSYKLAADRNTLQRIVQTPYRGLIYDR
NGKILVQNTPVYDLMVVPREVKTLDTTRFCQLLQLSVEELREGLLAAKIYSRVKASPLVQ
NLSTPELAAIQDNLMDFPGFSIKARMARSYQDTVLAHALGYVGPVSPAMLEKPKYAKYQA
GDNLGISGLESFYEQELMGRRGVQYRMVNVRGIEKGAFRGGEFDTLSVAGQDLHTSIDLE
LQRYGELLMKGKRGSVVAIDPKTGEILAFVSAPFYNPNQLTGKGLGNRYMDLLNNPERPL
FNRPLMATYPPGSVFKLVNELIALQEGVVTPYTGFPCNWKLVRCTHRHENPSNLSIAIKN
SCNPYFYQVMRATVMRGRSSKKNQDAALGLADWRQNVVSFGLAQHLGVDLPGERMGLIPS
PNFYDKRYGKNHWNFRTVYSLAIGQGEIGITGLQMANILATIANRGYYYPPHFVRGIGKD
GPRPEYQVKHKTTVDPQYFEALIPGMQAVVDGGRGATGSFASLASLGISVAGKTGTVQNP
HGEDHATFAAFAPAEDPKIAIAVFIENAGFGGVSAAPLASLMMEKYLRGSISPGRKPWEY
WVMNGKFISKKKH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatatctcgaaggccgcaaatacgtggttctggccatcttcctggccgtagcatcg
atatttggcgcccgccttttctacattcaggtgctggacggcagctacaagctggccgcc
gaccggaatacgttgcagcgcatcgtacaaacgccctatcggggcctgatttacgaccgc
aacggcaaaatactggtgcagaacacgccggtatacgacctgatggtggtgccgcgcgaa
gtaaaaaccctggataccacccgcttttgtcagctgctgcagctatccgtggaagaactg
cgcgaggggctgctggccgccaaaatttactcccgggtaaaggcctcgccgctggtgcag
aacctgagcacacccgagctggctgccattcaggataacctgatggactttcctggcttc
agcatcaaagcccgcatggcgcgctcctaccaggatacggtgctggcgcacgccctaggc
tacgtggggccggtgtcgccggccatgctggagaagccgaaatatgctaaataccaggcc
ggcgacaacctgggcatcagcggcctggagtcgttttacgagcaggagctgatgggccgc
cggggcgtgcagtaccgcatggtaaacgtgcgtggcattgagaaaggcgccttccggggc
ggcgagttcgacacgctttccgtggccgggcaggacctgcacaccagcatcgacctggag
ctgcagcgctacggcgagctgctgatgaagggaaagcgcggctctgtggtggctattgac
cccaaaaccggcgagattctggccttcgtttcggccccattctacaatcctaaccagctc
acgggcaagggcctgggcaaccgctacatggacctgctcaataacccggagcggcccctg
ttcaaccgcccgctgatggctacctacccgccgggctcggtgtttaagctggtgaacgag
ttgattgccctgcaggaaggcgtggtaacgccctacacgggctttccctgcaactggaaa
ttggtgcgctgcacccaccgccacgagaatcccagcaacctgagcatcgccattaaaaat
agctgtaacccttacttctatcaggtaatgcgggctaccgtgatgcgcggccgctccagc
aagaaaaaccaggatgccgccctgggcctggccgattggcggcaaaacgtggtgagcttt
ggtctggcccagcacctgggcgtggatttgccaggcgagcgaatgggtctgattccttcc
cccaatttctacgacaagcgctacggcaaaaaccactggaacttccgcacggtgtattcg
ctggccatcgggcagggcgaaattggcattacgggcctgcaaatggccaatattctggcc
accattgccaaccgcggctactactaccccccgcactttgtgcgcggcattggcaaagac
ggcccccggccggagtatcaggtaaagcacaagaccaccgtagaccctcaatattttgag
gcgctcattcccggtatgcaggccgtggtggatgggggccggggtgctaccggtagcttt
gccagcctggccagcctgggcatttccgtagcgggcaaaaccggtacggtgcaaaacccc
cacggcgaagaccacgccacgtttgcggcgtttgccccggccgaagaccccaaaattgcc
attgccgtgtttattgaaaatgccggctttggtggggtttctgccgcgccgctggcttcg
ctcatgatggagaaatacctgcgcggcagcatctcgcccgggcgcaaaccctgggaatat
tgggtgatgaacggcaaattcatcagcaaaaagaaacactaa
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