Hymenobacter sp. DG25B: PK28_04970
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Entry
PK28_04970 CDS
T03500
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyd02000
]
PK28_04970
Transporters [BR:
hyd02000
]
Other transporters
Pores ion channels [TC:
1
]
PK28_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
MetallophosN
CooC_C
Dockerin_1
TTR_TEN1-4
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
AIZ65023
UniProt:
A0A0A7LR83
LinkDB
All DBs
Position
complement(1153289..1156312)
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AA seq
1007 aa
AA seq
DB search
MTHLTFLPALGLALFSGTALANAAPTSLENKAPLAVAAIVPDVPVTGRVVDNQGAGLPGV
NVVVKGTTNGAQTDVDGNYTLNVPENATLVFSYIGYTTQEIVLNGRTSVNITLLQEATTL
NDVVVVGYGTQQKRDLTGAVGRVDAEEIVRQPVTTPTQAIQGKVAGVQIISDGGPNSQPK
VRIRGTGTLLAGAEPLYVVDGVQTTDIRNLSNSDIATIDVLKDASAAAIYGVRGANGVII
ITTKQGKVGKPVLSYNTTMGFKQAAHLVDMADAQQYADYLKDTAPDLTLPAYSGSTDWYD
EILRRATYQNHNLAVSGANENVRYYFSGNLLQDDGLAISNKFSRLTVRSNTAFTVSDKLT
INSQASFSHANTKDVNFATAYQNAYRAAPIIPSKVDGRYGNTSAFGNVGNPLLDIEKNNN
RSLENRLQGNVGVDFKPVSALTLRSAINVDLNFDNRIIYDYQYNSDESTFITAGGNQRTL
RSNLSTIQNNRNRYLWENTATFQKQFDKHNLTVLAGTVTEQGESRTLEGSRKDVGPNKDQ
WYLGAGDPNTSTNNAVGAIDRRLSLLGRINYSYADRYLLTTNLRYDGTSRFNKDQRWGFF
PSLGLGWVLSEEDFMKSQTVLSFLKLRASYGQLGNDQIDPNAYIVTAESNVPYVFNGQPV
LGAIINQIKDRNVSWETTTEYDAAVEFALLENRLSGELTYYQKKTTDALIPVNIPGNLGD
PDNQYITNAADISNKGIEAALNWRNQLSTDWSYNFGVNATFNKNRIEKLNGGQALFGGFN
NVTLSDNGVAAGSFYVLKSTGIFQSQAEIDGYPKYNGLPTPQPGDLKYADANGDGVISLL
DRVHSGSYQPPVYFGINGGMNYQKFDFSFVFSGNLNNEVYNAKKQFRYQTTDNVEADFAD
NRWTATNGSQSDPRTISNNTPNSTYFIESGSYLRLNNLVLGYTIPTSFTQKAKISYVRIF
ATGQNLFTVTKYSGFTPELPGGPLDSGIEATTYPTSRTLALGLNVNF
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
ctgactcatctaacatttttgccggcgctgggcctggcgctattttccggcaccgccctg
gcaaatgccgcccctaccagcctggagaataaagctccgctggccgtggccgcaatcgtt
cccgatgtgcccgtaaccgggcgcgtggtggataaccagggcgcgggcctacccggcgta
aacgtggtggtgaaaggcactaccaacggcgcccagaccgatgtcgacggtaactatacg
cttaatgtgccggagaatgccacgctggttttctcctatattgggtacaccacgcaggaa
atagttctcaatgggcgcacctcagttaatataactctgctacaggaagctaccacgctg
aatgatgtagtggtggtaggttacggcacccagcaaaagcgcgacttaaccggcgcggta
ggccgcgtggatgcggaagaaattgtacggcagcccgttactacccctacccaggctatt
cagggtaaagtggccggtgtgcagatcatcagcgacggggggcctaactctcagcctaaa
gtgcgcatccggggtacgggcacgctgctggctggtgccgagccgctgtacgtggtggac
ggggtgcagaccacggacatccgtaacctgagcaactccgacattgctaccattgacgtg
ctgaaagacgcttcggctgcggccatttatggggtacgcggcgccaatggcgttatcatc
atcaccaccaagcaaggcaaagtgggcaagccggtgctaagctacaataccaccatgggc
tttaagcaggccgcccatttggtagacatggccgatgcccagcagtatgccgactatctg
aaagacactgctcctgacctgacgctgccagcctattcgggctctaccgattggtacgat
gagattctacggcgggctacttaccagaaccataacttggccgtatcgggcgccaatgaa
aatgtgcgctactatttcagcggcaacctgctgcaggatgatggcctggctatcagcaac
aagttttcccgcctcacggtacgctccaacacggcttttacggtttccgataagctgacg
ataaactcgcaggcctcgtttagccacgccaacaccaaggacgtgaactttgccacggcg
tatcagaatgcgtaccgcgcggcccccattattccctctaaagtagacggccggtacgga
aatacctcggcgttcggtaacgtgggcaacccgctgctcgatatcgaaaaaaacaacaat
cgttccctggaaaaccgcctgcagggcaacgtaggggttgatttcaagccggtttcggct
ctcaccctgcgttcagccattaacgtggatctgaactttgataaccggattatctacgat
tatcagtacaacagcgacgaaagcacctttattacggctgggggcaaccagcgtacgctg
cggagcaacctgtctactattcagaacaaccgcaaccgctacctctgggaaaatacggcc
acgtttcagaagcagtttgataagcataacctgacggtgctggccggcacggtaacggaa
cagggcgagtcgcgcaccttggaaggcagccgcaaggatgtagggcctaacaaagaccag
tggtacctgggtgccggcgacccaaatacgtccacgaacaatgccgtgggcgccatagac
cggcgcctgtccctgctgggacgtataaactactcttacgccgaccgctacctgctgacc
accaacctgcgctacgatggcacctcccggttcaacaaagaccagcgctggggctttttc
ccctccctgggcttaggctgggttctgtcggaagaagattttatgaagagccagacggtg
ctgagcttcctgaagctgcgcgccagctacggccagttgggcaacgaccagattgacccc
aacgcttacattgtaacggcggagtctaatgttccttatgtctttaatgggcagcccgtg
ctgggcgccattatcaaccagattaaggaccggaatgtgagctgggaaaccaccacggag
tatgatgccgccgtggaatttgcgctgctggagaaccgcctctccggcgagctgacttac
taccagaagaaaaccacggatgccctgatcccggtgaatattcccggtaacctcggcgac
ccggacaaccagtacatcaccaacgccgccgatatcagcaacaaaggcattgaagccgcg
ctgaactggcgcaaccagctgagcaccgactggagctacaactttggggtgaatgctact
ttcaacaaaaaccggattgaaaagctgaacggcgggcaggctctttttgggggcttcaac
aacgttacgctctccgataacggcgtggcggctggcagcttttatgtgctcaagtccacg
ggcatcttccagtcgcaggcggaaattgatggctaccccaagtataacggcctacccaca
ccccagcccggcgacctgaaatatgcagatgccaacggcgacggcgtgatttcactgctg
gaccgggtacactccggctcgtatcagccgccggtgtacttcggtattaatggcggcatg
aactatcagaagttcgatttctccttcgtgttttccggcaacctgaacaatgaggtgtac
aacgccaaaaagcagttccgctaccagaccacggacaacgtagaggccgactttgccgac
aaccgctggacggccaccaacggctcgcagtcggacccgcgcaccatttccaacaatacg
cccaactccacttacttcattgagtcgggctcctacctgcggctgaataacctggtgctg
ggctacaccattcccaccagcttcacgcagaaggccaagatttcctacgtgcggattttt
gccacgggccagaacctgttcaccgtcaccaagtactccggcttcacgcccgagctaccc
ggtggcccgctggattccggcatcgaagctactacgtatcccaccagccgcacgcttgcg
ctggggctgaatgttaatttttaa
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