Hymenobacter sp. DG25B: PK28_05955
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Entry
PK28_05955 CDS
T03500
Name
(GenBank) DNA repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_05955
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PK28_05955
TLS (translesion DNA synthesis) factors
Other SOS response factors
PK28_05955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
BORCS6
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
AIZ63355
LinkDB
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Position
1390829..1392502
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AA seq
557 aa
AA seq
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MLVDLRIQNYALIEQLELRPSALLNIITGETGAGKSIMLGAIGLLLGNRADSRLLFNTER
KCVIEGQFDISSYHLQDIFESEDLDYDTQCILRREISPAGKSRAFVNDTPVTLETLRHIG
ANLMDIHSQHDTLLLGDAVFQLNLLDLYAGLVPTRAQYSSSYRQYRKLEADLKDLESQVA
QANKELDYHSFLLSELEEARLDNEDQEAQEQEIKQLEHAEEIKVKLSHAYQSLSESEYCA
TGSMKEAATLLGQIAGYADAFKELKQRLDSCLIELHDIADEVEAAERRTEADPKRLDELQ
SRLTVLYNLQRKHQVRDMEALLAVREELRQKVSSVLNLDKEISRLRKDTDGALATVTRQA
TRLSEARQKAFPLFELELSSLLADLGMPHARIVVQHHTGQPGPSGTDVVSILFTANKGAQ
PQTLSKAASGGEFSRLMLCIKYMLADKTALPTIVFDEIDTGISGEIAVKVGRMMQQMAQK
HQLVAISHLPQMAAAGDTHYFVYKEDRADRTVSRIRQLNTEERIREIAQMIAGANPSEHA
FQSARELLAMRGEVMMG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttgatcttcgaattcagaactacgctctcattgagcaactggagctgcggcct
tcggccctgctcaacattattaccggcgaaaccggtgcgggcaagtccattatgctcggc
gccattgggcttttgctcggtaaccgcgccgattcgcgcctgctcttcaacacggagcgc
aagtgcgtgattgaaggccagtttgatatttccagctaccacttgcaggatattttcgag
tcggaagacctcgattatgatacccagtgtattctgcggcgggaaatcagcccggccggg
aaatcccgggcatttgtaaacgatacgcccgtgacgctggaaaccctgcggcacattggc
gccaatctgatggacattcactcccagcacgatacgctgctgctgggggatgccgtgttt
cagctgaacctgctggatttgtatgccggcctggtgcccacccgggcccaatacagcagc
tcctaccgccagtaccgcaagctggaagccgacctgaaagacctggaaagccaggtagcc
caagccaacaaagagctggactaccatagctttttgctgagtgagctggaagaagcccgc
ctcgataacgaagaccaggaagcccaggagcaggaaatcaagcagctggagcacgccgag
gaaatcaaggtgaagcttagccatgcctatcagtcgctgtcagaaagcgagtattgcgcc
accggcagcatgaaagaagccgctacgctgctgggccagattgcgggctacgctgatgcc
ttcaaagagctaaagcagcgcctcgacagctgtctgattgagctgcacgatattgccgac
gaggtagaagccgccgagcgccgcaccgaagccgaccccaagcgcctcgatgagctgcaa
agccgcctcacggtgctctataatctgcagcgcaaacaccaggtgcgcgacatggaagcc
ttgctggccgtgcgcgaggagctgcgccagaaagtaagctccgtcctgaatctggacaaa
gaaatttcccgcctgcgcaaagacacagatggtgcgctggccaccgttacgcgccaggcc
acccggctttccgaggcccgacaaaaagcattcccgctgtttgaactggagctgtcttcc
ctgctggcagacctgggcatgccgcacgcgcgcattgtagtgcagcaccacacggggcag
cccggccccagcggtaccgatgtggtgagcatactattcacggccaacaaaggcgcccag
ccccaaaccctgagtaaagccgcctccggtggggaattctcccgcctgatgctgtgcatc
aaatacatgctggccgataaaaccgcgctgcccaccatcgtattcgatgaaattgacacc
ggtatttccggcgaaatagccgtgaaagtaggccgcatgatgcagcaaatggcgcaaaag
caccagttggtagccatttcgcatctgccgcaaatggccgctgccggcgatacgcactac
tttgtgtacaaggaagaccgcgccgaccgcaccgtgagccgcatccgccaactgaacacc
gaggagcgcatccgggaaattgcacaaatgattgcgggggctaaccccagtgagcatgcc
ttccagagtgcccgcgaattgctggccatgcgcggcgaagtgatgatgggctga
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