KEGG   Hymenobacter sp. DG25B: PK28_06640
Entry
PK28_06640        CDS       T03500                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
hyd  Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyd03400]
    PK28_06640
DNA repair and recombination proteins [BR:hyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PK28_06640
    Archaeal homologous recombinant proteins
     PK28_06640
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 MscS_porin AAA_21 ABC_tran LMP AAA_15 nSTAND3 AAA_22 cobW
Other DBs
NCBI-ProteinID: AIZ63446
UniProt: A0A0A7LJA4
LinkDB
Position
complement(1552785..1556216)
AA seq 1143 aa
MKILRVRFYNLNSLRGEHTVDFSQTPLVDAGLFAITGPTGAGKTTILDAITLALYGQVPR
HETSGPEHVMSHGTGESWAEVEFEVNGQEYRSKWSQYRARRKPEGNLQDPKMELSERKVA
EDGTETWPFLETMKRNVPVRVAELSGLEYKQFLRSVLLAQGDFTRFLKAPAGERAQLLEK
ITDTRKYSDISRAAFERAKQETQQVEQLRAGLAGLVLLSPEEVSSFESEIQELTNQLTTA
TAAQEHLREARQWQLRLRELRLKLQTTQERQQQLQLQAETLVSIRQRVAVHQQAAPFRTP
WALLQQADTHLQRLHHEAEQFRRQLPQQQEQLAQVRQARQAAQTVHQQAQAVLQQQEPEL
REAERLDSLIGQAEAQLIKEKQEYDLNNEQCKRSKAEADQATTRLHTLQHTLHHLDKWLT
DNARLSELADILPELSANAQDWDSLATERGQLNQRLSEAQQRLRTLQTAAEQHQKEAAQA
RRQLEQLAADQAAATAEHSTWLRRLRHHVAFLHQEQEQQQQHWDDLRRSVHLQQLVLSHA
ETRQLLIPGQACPVCGATEHPYLAGVLGVSEDGFQRDQQREEALSQRVRALGTRFNHLNT
FLAMLEQLAPEPSPSDEPIPLLAEADEKAASDTIKALVKHIQDLARQRTSAELQLQQANT
QHHHAARQAQDFTLEAQKISALLADNAERTPVVKEMLTSLLANFGIAFQGENGRGLLEQA
GRRSAEFRQRQQQRADAERELGELKAAAAKAEAEKGQLQAWLSARKQALVEQHAAIQAQQ
KQRQQLFAGPDVTAALQQLAATVEQAAREMERRQQLEQEQETALALATAALRQREQDAQR
QQQQRQQQHDELVAALTGAGLAPDPATLPALLLDDHEMRQLADQLRQHEQEVAAAQHALA
DITQQLQQEDARALSPEPLEQLEAQLTTTNQQLAALNQQLGQRQERLGSHQSGLERHAAL
ALELEKQQQEARRWRQLAELIGSADGKKFSEFAQGLTLARLIDLANRHLHRFTDRYRILR
NPEQHLDLLIQDDYQASSVRTMNSLSGGESFLVSLALALGLSELAGRKTQIDTLFIDEGF
GTLDPDTLDVALSALEMLQGTGKTIGIISHVEALKERVTTQINIRKGAGGFSSIQVLGFG
EEV
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgaaaattctccgcgtccgcttttataatctgaactccctgcgcggggagcacaccgtc
gatttcagccagacaccgctggtagatgccggcctgtttgccattaccggccctaccggc
gcgggcaaaaccaccattctcgatgccattaccctggccctttatggccaggtgccccgc
cacgaaaccagcggccccgagcacgtgatgagccacggcaccggcgaaagctgggccgaa
gtggagttcgaagtaaacggccaggagtaccgcagcaagtggagccagtaccgcgcccgc
cggaagccggaaggcaacctccaggaccccaaaatggagctcagcgaaaggaaggtggca
gaagacggcacggaaacctggccgtttctggaaaccatgaagcgcaacgtgccggtacgc
gtggccgagttgagcggcttggagtacaagcagtttctgcgctccgttttgctggcgcag
ggcgacttcacccgctttctgaaagccccggccggggagcgggctcagctgctggagaag
attaccgacacccgcaagtactccgatatttcgcgggcagcgtttgagcgggccaagcag
gaaacccagcaggtagagcagctgcgcgcgggcctggcgggcctggtgctgctctcgccg
gaggaggtatcctcgttcgaatccgagattcaggagctgactaaccagctgactaccgcc
acagcggcccaggaacacctgcgcgaggcccggcagtggcagctgcgcctgcgggagctg
cgcctcaagctccaaactacgcaggagcgtcagcagcagcttcagcttcaggccgaaacc
ctggtttccattcggcagcgcgtggcggtgcaccagcaggcagcgcccttccgcacgccc
tgggcgttgctccagcaggccgatacccatctgcaacgcctgcaccacgaagccgagcaa
ttccgtcggcagctaccgcagcagcaggagcagctggcgcaggtgcggcaggcccgccag
gcagcccaaactgtgcaccagcaggcccaggccgtactgcagcagcaggagccggagctg
cgcgaggccgaacggctggatagccttattggccaggccgaagcccagctcattaaggaa
aagcaggagtacgacctaaacaacgagcagtgcaagcgcagtaaggccgaagccgaccaa
gccactacccgcctgcatacgctgcagcacacgctgcaccacctggacaagtggctgacc
gacaatgcccgcctgagtgagctggccgatatcctgccggaactgtcggccaacgcgcag
gactgggacagcctggctaccgagcggggccagctcaaccagcgcctaagcgaggcccaa
cagcgtctaagaacgttgcaaaccgctgctgagcagcatcagaaggaagccgcgcaggcc
cgtcggcagctggagcagctggccgccgaccaggccgccgccacggctgagcatagcact
tggctgcgccgcctgcgccaccatgtagccttcctgcaccaggagcaggagcagcagcag
cagcattgggacgatttgcgccgcagtgtgcacctgcagcaattggtattgtcgcatgct
gaaacccgccagctgctaatcccggggcaggcctgcccggtgtgcggggccaccgagcac
ccctatctggccggggtgctgggcgtgagcgaagacggctttcagcgcgaccagcagcgg
gaagaggcgctcagccagcgcgtgcgcgccctcggtacccgcttcaatcacctgaatacc
tttttggccatgttagagcagctggcccctgagccttcgccctccgacgagcccatcccg
ctgctggctgaagccgacgaaaaagctgccagtgacaccataaaggccctcgtaaaacac
atccaggatcttgcgcgccaacgcaccagcgccgagctacagctgcagcaagccaacact
cagcaccaccacgccgcccggcaagcgcaggactttacccttgaagctcaaaaaatttcc
gcgctcctggccgataacgccgagcgcacgcccgtagtgaaagaaatgctaaccagctta
ctggcgaatttcggcattgcgtttcagggagaaaatggccggggccttctggagcaagcg
ggccgccgcagtgctgagtttcgccaacgccagcagcagcgcgccgatgccgagcgcgag
ttgggtgagttgaaagccgcggcagccaaagccgaagccgagaaggggcagctgcaagct
tggttgtcggcccgtaaacaggcgttagtggagcagcacgccgccattcaggcgcagcag
aagcaacggcagcagttgtttgccggccctgacgtgacggccgcacttcagcaactggcg
gcgactgtagagcaggcagcccgggagatggaacgcaggcagcagctggaacaggagcag
gaaacagccctggctttggctaccgccgcccttcgccagcgcgagcaggatgcccaacgc
cagcagcagcagcgccagcagcagcacgacgagttagtggcggctctcaccggcgctggt
ctggcccccgatccggccaccctaccggcattgctcctcgacgaccacgagatgcgccaa
ctggccgatcagctgcgccagcacgagcaggaagtagccgcggcccagcacgccctggcc
gacatcacgcagcagctgcagcaggaagatgcccgcgccctcagccctgagcccttggag
cagctggaagcgcaattaaccaccaccaaccagcagctggccgcactcaatcagcagctg
ggccagcggcaggaacggctgggcagccaccagtcaggcctggagcgccatgccgccctg
gccctggagctggaaaagcagcagcaggaagcccgccgctggcggcagctcgcggagctc
atcggctcggccgatggcaagaagttcagcgagtttgcccagggccttacgctggcgcgc
cttatcgacctggccaaccgccacctgcaccgtttcacggaccgctaccgcatcctgcgc
aaccccgagcagcacctcgatttgctgattcaggacgattaccaagccagcagcgtgcgc
accatgaactcgctttccggtggcgagagttttctggtgagcctggcgctggcgctgggc
ctctcggagctggccgggcgcaaaacgcagattgataccctgttcattgacgagggcttc
ggtacgctagaccccgatacgctggacgtggcgctttcggcgctggaaatgctgcagggc
acgggcaaaaccatcggcatcatttcccacgtggaggcgctgaaggagcgcgtcaccacg
cagatcaacatccggaagggcgcgggcgggttcagctccattcaggtgctgggctttggc
gaggaagtttag

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