Hymenobacter sp. DG25B: PK28_06640
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Entry
PK28_06640 CDS
T03500
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_06640
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PK28_06640
Archaeal homologous recombinant proteins
PK28_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
MscS_porin
AAA_21
ABC_tran
LMP
AAA_15
nSTAND3
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
AIZ63446
UniProt:
A0A0A7LJA4
LinkDB
All DBs
Position
complement(1552785..1556216)
Genome browser
AA seq
1143 aa
AA seq
DB search
MKILRVRFYNLNSLRGEHTVDFSQTPLVDAGLFAITGPTGAGKTTILDAITLALYGQVPR
HETSGPEHVMSHGTGESWAEVEFEVNGQEYRSKWSQYRARRKPEGNLQDPKMELSERKVA
EDGTETWPFLETMKRNVPVRVAELSGLEYKQFLRSVLLAQGDFTRFLKAPAGERAQLLEK
ITDTRKYSDISRAAFERAKQETQQVEQLRAGLAGLVLLSPEEVSSFESEIQELTNQLTTA
TAAQEHLREARQWQLRLRELRLKLQTTQERQQQLQLQAETLVSIRQRVAVHQQAAPFRTP
WALLQQADTHLQRLHHEAEQFRRQLPQQQEQLAQVRQARQAAQTVHQQAQAVLQQQEPEL
REAERLDSLIGQAEAQLIKEKQEYDLNNEQCKRSKAEADQATTRLHTLQHTLHHLDKWLT
DNARLSELADILPELSANAQDWDSLATERGQLNQRLSEAQQRLRTLQTAAEQHQKEAAQA
RRQLEQLAADQAAATAEHSTWLRRLRHHVAFLHQEQEQQQQHWDDLRRSVHLQQLVLSHA
ETRQLLIPGQACPVCGATEHPYLAGVLGVSEDGFQRDQQREEALSQRVRALGTRFNHLNT
FLAMLEQLAPEPSPSDEPIPLLAEADEKAASDTIKALVKHIQDLARQRTSAELQLQQANT
QHHHAARQAQDFTLEAQKISALLADNAERTPVVKEMLTSLLANFGIAFQGENGRGLLEQA
GRRSAEFRQRQQQRADAERELGELKAAAAKAEAEKGQLQAWLSARKQALVEQHAAIQAQQ
KQRQQLFAGPDVTAALQQLAATVEQAAREMERRQQLEQEQETALALATAALRQREQDAQR
QQQQRQQQHDELVAALTGAGLAPDPATLPALLLDDHEMRQLADQLRQHEQEVAAAQHALA
DITQQLQQEDARALSPEPLEQLEAQLTTTNQQLAALNQQLGQRQERLGSHQSGLERHAAL
ALELEKQQQEARRWRQLAELIGSADGKKFSEFAQGLTLARLIDLANRHLHRFTDRYRILR
NPEQHLDLLIQDDYQASSVRTMNSLSGGESFLVSLALALGLSELAGRKTQIDTLFIDEGF
GTLDPDTLDVALSALEMLQGTGKTIGIISHVEALKERVTTQINIRKGAGGFSSIQVLGFG
EEV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctccgcgtccgcttttataatctgaactccctgcgcggggagcacaccgtc
gatttcagccagacaccgctggtagatgccggcctgtttgccattaccggccctaccggc
gcgggcaaaaccaccattctcgatgccattaccctggccctttatggccaggtgccccgc
cacgaaaccagcggccccgagcacgtgatgagccacggcaccggcgaaagctgggccgaa
gtggagttcgaagtaaacggccaggagtaccgcagcaagtggagccagtaccgcgcccgc
cggaagccggaaggcaacctccaggaccccaaaatggagctcagcgaaaggaaggtggca
gaagacggcacggaaacctggccgtttctggaaaccatgaagcgcaacgtgccggtacgc
gtggccgagttgagcggcttggagtacaagcagtttctgcgctccgttttgctggcgcag
ggcgacttcacccgctttctgaaagccccggccggggagcgggctcagctgctggagaag
attaccgacacccgcaagtactccgatatttcgcgggcagcgtttgagcgggccaagcag
gaaacccagcaggtagagcagctgcgcgcgggcctggcgggcctggtgctgctctcgccg
gaggaggtatcctcgttcgaatccgagattcaggagctgactaaccagctgactaccgcc
acagcggcccaggaacacctgcgcgaggcccggcagtggcagctgcgcctgcgggagctg
cgcctcaagctccaaactacgcaggagcgtcagcagcagcttcagcttcaggccgaaacc
ctggtttccattcggcagcgcgtggcggtgcaccagcaggcagcgcccttccgcacgccc
tgggcgttgctccagcaggccgatacccatctgcaacgcctgcaccacgaagccgagcaa
ttccgtcggcagctaccgcagcagcaggagcagctggcgcaggtgcggcaggcccgccag
gcagcccaaactgtgcaccagcaggcccaggccgtactgcagcagcaggagccggagctg
cgcgaggccgaacggctggatagccttattggccaggccgaagcccagctcattaaggaa
aagcaggagtacgacctaaacaacgagcagtgcaagcgcagtaaggccgaagccgaccaa
gccactacccgcctgcatacgctgcagcacacgctgcaccacctggacaagtggctgacc
gacaatgcccgcctgagtgagctggccgatatcctgccggaactgtcggccaacgcgcag
gactgggacagcctggctaccgagcggggccagctcaaccagcgcctaagcgaggcccaa
cagcgtctaagaacgttgcaaaccgctgctgagcagcatcagaaggaagccgcgcaggcc
cgtcggcagctggagcagctggccgccgaccaggccgccgccacggctgagcatagcact
tggctgcgccgcctgcgccaccatgtagccttcctgcaccaggagcaggagcagcagcag
cagcattgggacgatttgcgccgcagtgtgcacctgcagcaattggtattgtcgcatgct
gaaacccgccagctgctaatcccggggcaggcctgcccggtgtgcggggccaccgagcac
ccctatctggccggggtgctgggcgtgagcgaagacggctttcagcgcgaccagcagcgg
gaagaggcgctcagccagcgcgtgcgcgccctcggtacccgcttcaatcacctgaatacc
tttttggccatgttagagcagctggcccctgagccttcgccctccgacgagcccatcccg
ctgctggctgaagccgacgaaaaagctgccagtgacaccataaaggccctcgtaaaacac
atccaggatcttgcgcgccaacgcaccagcgccgagctacagctgcagcaagccaacact
cagcaccaccacgccgcccggcaagcgcaggactttacccttgaagctcaaaaaatttcc
gcgctcctggccgataacgccgagcgcacgcccgtagtgaaagaaatgctaaccagctta
ctggcgaatttcggcattgcgtttcagggagaaaatggccggggccttctggagcaagcg
ggccgccgcagtgctgagtttcgccaacgccagcagcagcgcgccgatgccgagcgcgag
ttgggtgagttgaaagccgcggcagccaaagccgaagccgagaaggggcagctgcaagct
tggttgtcggcccgtaaacaggcgttagtggagcagcacgccgccattcaggcgcagcag
aagcaacggcagcagttgtttgccggccctgacgtgacggccgcacttcagcaactggcg
gcgactgtagagcaggcagcccgggagatggaacgcaggcagcagctggaacaggagcag
gaaacagccctggctttggctaccgccgcccttcgccagcgcgagcaggatgcccaacgc
cagcagcagcagcgccagcagcagcacgacgagttagtggcggctctcaccggcgctggt
ctggcccccgatccggccaccctaccggcattgctcctcgacgaccacgagatgcgccaa
ctggccgatcagctgcgccagcacgagcaggaagtagccgcggcccagcacgccctggcc
gacatcacgcagcagctgcagcaggaagatgcccgcgccctcagccctgagcccttggag
cagctggaagcgcaattaaccaccaccaaccagcagctggccgcactcaatcagcagctg
ggccagcggcaggaacggctgggcagccaccagtcaggcctggagcgccatgccgccctg
gccctggagctggaaaagcagcagcaggaagcccgccgctggcggcagctcgcggagctc
atcggctcggccgatggcaagaagttcagcgagtttgcccagggccttacgctggcgcgc
cttatcgacctggccaaccgccacctgcaccgtttcacggaccgctaccgcatcctgcgc
aaccccgagcagcacctcgatttgctgattcaggacgattaccaagccagcagcgtgcgc
accatgaactcgctttccggtggcgagagttttctggtgagcctggcgctggcgctgggc
ctctcggagctggccgggcgcaaaacgcagattgataccctgttcattgacgagggcttc
ggtacgctagaccccgatacgctggacgtggcgctttcggcgctggaaatgctgcagggc
acgggcaaaaccatcggcatcatttcccacgtggaggcgctgaaggagcgcgtcaccacg
cagatcaacatccggaagggcgcgggcgggttcagctccattcaggtgctgggctttggc
gaggaagtttag
DBGET
integrated database retrieval system