Hymenobacter sp. DG25B: PK28_07385
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Entry
PK28_07385 CDS
T03500
Name
(GenBank) D-alanine--D-alanine ligase
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00470
D-Amino acid metabolism
hyd00550
Peptidoglycan biosynthesis
hyd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PK28_07385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PK28_07385
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PK28_07385
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_N
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AIZ63558
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All DBs
Position
complement(1721189..1723960)
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AA seq
923 aa
AA seq
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MKIGIFFGGPSREREISFAGGRTVYDNLDKSLFQAVPVFVDSRGNFILLDWHYIYKGTIR
DFYPPVSALPASEHKLQVYLESLGELSLAQQDEIINQVGRRIQPQELSSLMDFAFLALHG
PGGEDGAIQGLLEWYGIPYSGSGVLPSAFGIDKIAQKKLLHALNRPTPEFRVVSAEEWDA
ADPAATLAYLERELGLPLVFKAPRQGSSIGISILRTANVEAFHRAMERSLFRKTVTRDDW
QRLSERDKIMWVQQLTDIREGIGLPVMLDADDEHIIYHPEALLNTLAERLQTAEQVRLTN
VDGETQVLVESFVQGREFSCIVVEDPNGQPLALPPTEIVKGEEMFDYRSKYLPGLARKIT
PIDLPEDEIQRIREACEEMFRTFGFQVYARLDGFISSQLPVAGSQISGEETGNSQPATEN
SIFLNDPNTTSGMLPASFFFHQAAEIGLNPSQFLTYLIRTSLAARRRAGMRPVQLQRLLR
GLDAAVAARGHEERQRIKVAVIMGGYSSERHISVESGRNIYEKLSSSIKYEPVPVFLTGN
NQDFRLYVLPINVMLKDNADDIKEKVEHMEAGHSLHPILERIRREAEAITSTYAGQPTAQ
PRRVSFEELAKMVDEVFIALHGRPGEDGALQQQLEKFGLPYNGSGVGSSSITINKFETNR
RLREAGMRVAEHRMANRLEWQADAEGFYRSLETQFPYPFIAKPADDGCSSAVKKVKNRPE
LEAFTRLIFREQEDLMIPDAETLHLGFKEEFPRKDAFLVETLIERDGAAHFLEITGGLLT
HWRSDGQLDIEVFEASEALATGEVLSLEEKFLAGEGQNITPARYAADAIERQRISDEVKE
ELRRVAEILNIQGYARIDAFVRVRDNGAVEVIIIEVNSLPGMTPATCIFHQTALAGYTPY
DFIDQILEFGKERTRKEKLAVNS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggcatcttcttcggcggaccgtcgcgtgagcgggaaatttcctttgcgggc
ggccgcactgtatatgataacctggacaagtcgctgtttcaggccgttcccgtattcgtg
gacagccgcggcaacttcatcctgctggactggcactacatttataaaggcaccatccgg
gacttttatccgcccgtttcggccctgcctgcctccgaacacaagctgcaggtgtacctg
gaaagcctgggcgagctgagccttgcccaacaggacgaaattatcaatcaggtaggccgc
cgtattcagccgcaggagctgagcagcctcatggattttgccttcctggctctgcatggt
cccggcggcgaagatggcgctattcagggcctgctggagtggtacggcattccgtattcc
ggctccggcgtgctgccctcggcctttggcatcgataaaattgcccagaaaaagctgctc
cacgccctgaaccggcccacgccggagttccgcgtggtatcggccgaagaatgggacgcc
gccgacccggctgctaccctggcttacctggagcgcgagctgggcttgccgctggtgttc
aaagccccgcgccagggcagcagcattggcatcagcattctgcgcaccgccaacgtggag
gctttccaccgcgccatggagcgcagcctgttccgcaaaaccgtgacccgcgacgattgg
cagcgcctctcggagcgcgacaaaatcatgtgggtgcagcagctcaccgacatccgtgag
ggcattggcctgcccgtgatgttggatgccgatgatgagcacattatctaccaccccgag
gccctgctaaacacgctggctgagcgcctgcaaaccgccgaacaggtgcgcctgaccaac
gtggacggcgaaacccaggtgctggtggaaagctttgtacagggccgcgagttttcctgc
attgtggtggaagaccccaacggtcagccactggcgctgccgcccacggagattgtgaag
ggcgaggagatgttcgactaccgctcgaaatacctgcccggcctggcccgcaaaatcacc
cccatcgatttaccggaagacgaaattcagcgcatccgggaagcctgtgaggagatgttc
cgcacgttcggcttccaggtgtacgcgcggctggatgggtttatcagttcccagttacca
gttgccggttcccagatttcaggtgaagaaactggcaactcgcaaccggcaactgaaaac
tccattttcctcaacgacccgaacaccacgtcgggcatgttgccggcctcgttcttcttc
caccaggcggcggaaatcgggctcaatccttcgcagtttctgacctatctgattcgcact
tctctggcagcacgccgccgggcgggtatgcggcccgtacagctgcagcgcctgctgcgt
gggctggatgcggccgtagctgcccgcgggcacgaggagcgtcagcgcattaaagtggcc
gtcattatgggcggctattcttcggagcgccacatttcggtggaaagcggccgcaacatc
tacgagaagctcagctcctctattaagtatgagccggtgcccgtattcctgaccggcaac
aaccaggatttccgcctgtacgtgctgcctatcaacgtcatgctgaaggacaacgccgac
gacatcaaggagaaagtggagcacatggaggcgggccacagcctgcaccctattctggag
cgcatccgccgcgaagcagaagccattaccagcacctatgccggtcagcctaccgcgcag
ccgcgccgggtatcgtttgaggaactggccaagatggtagatgaggtgtttattgccctg
cacggtcgtcccggcgaggacggtgctttgcagcagcaactggaaaagttcggcctgccc
tacaacggctcgggcgtgggcagcagcagtatcaccatcaataagtttgaaaccaaccgc
cgcctgcgcgaagccggcatgcgtgtggccgagcaccgcatggccaaccgcctggaatgg
caggccgatgccgagggcttctaccgctccctggaaacgcagtttccctaccccttcatt
gccaagcccgccgacgacggctgctcttcggcggtgaaaaaagtaaagaaccgccctgag
ctggaggctttcacccgcctcatcttccgggagcaggaagacctgatgatacccgatgcc
gaaacgctgcacttaggcttcaaggaggaattcccccgcaaggacgccttcttggtagaa
accttgattgagcgcgacggcgcggctcacttcctcgaaattacgggcggtctgctcacc
cactggcgctccgatgggcagctggacattgaggtttttgaggcttccgaagcgctggct
accggtgaggtattgagcctggaggagaagttcctggccggcgaaggccagaacatcacc
ccggcccgctacgccgccgatgccattgagcgccagcgcatttccgacgaggtgaaggaa
gagctacgccgcgtggccgaaatcctgaacattcagggctacgcccgcatcgacgcgttt
gtgcgggtgcgcgacaacggcgcagtggaggtcatcatcatcgaggtaaactccctgccc
ggcatgacgcccgccacctgcatcttccatcaaaccgcgctggccggctacacgccctac
gatttcatcgaccagattctggagttcggcaaagagcgcacccgtaaagaaaagctggcg
gtgaacagctaa
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