KEGG   Hymenobacter sp. DG25B: PK28_08610
Entry
PK28_08610        CDS       T03500                                 
Name
(GenBank) hypothetical protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hyd  Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hyd02048]
    PK28_08610
Enzymes [BR:hyd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PK28_08610
Prokaryotic defense system [BR:hyd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PK28_08610
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DUF4145 Helicase_C DEAD HSDR_N Effector_1 SLFN-g3_helicase AAA_19 AAA_34 TPR_Nup160_C UvrD-helicase Fez1 Snapin_Pallidin
Other DBs
NCBI-ProteinID: AIZ63740
UniProt: A0A0A7LKH4
LinkDB
Position
complement(2022606..2025872)
AA seq 1088 aa
MSNSTSNFYFLREDFPALYTLGKEAEFLLYQDPVAALFKLRLYGEKLVDRLFSEHQLAPL
VENTQHRRLEELKRQGILPRQVEDILHLIKRKGNVAAHQNTGTAEDAALLLESAYHLGKW
LLDAYGENLLPEGILPFTLPQLRDTQQELAQLEAEKQALQARVLELQASLDARPVLSAPE
LAQLQEKAQKAADNLNLSEAETRAIIDEQLRSVGWEADTPTLRYNKGTRPEKGRNLAIAE
WQTTSGPADYALFVGMTLVGVVEAKRINKDVSAALQQAKRYAKDINLTTGVELLKSAPWG
VYQAPFLFATNGRPYHYQLPEKSGIWFLDGRQSINHSRALKGWYSPQALIELHKQDIAAA
EEALKNDSFDYLRSAHGLGLRDYQVTAIQRVEAVIEANEPERRALLAMATGTGKTRTILG
LVYRLLKSKRYRRILFLVDRKLLGIQATDSFNEVKMEGNLTLGEIYDLKELKDKLPEAET
RLHVATVQSLVKRIYSPEADTPALPIDAYDCIIIDEAHRGYTLDREMSEPQITYKDQLDF
LSTYKLVLDYFDAFRIGLTATPALHTVKIFGSPVFRYTYRQAVIDGYLIDHEPPILLKTK
LNQEGIVWEAGSTPQAYNPETQNIEELDRLEDELKIEVDGFNKLVLTESFNRTIAKMLVK
ELLPEGPEKTLIFAASDQHADLLVLILKEEFKNADIDVDEDAIIKITGTADQPQQLVKKF
KNEQYPTIVVTVDLLTTGVDIPRICNLVFMRRVRSRILYEQMLGRATRLADDIGKETFRI
YDAVRLYEALEPVTTMKPVVVDPSQTITELIEELDKIEQEEARQQQVEQILAKLQRKRNK
LTPTQIEKFAHGTNGQTLTQFINHLRTLPSVEAAALLKHYQPTLGWLSEAKAALKPLLYS
THQDVALEPERGYGGDSASPIQRPEDYLQSFAEFVQNNQNTIAALNIVCTNPKDLTRPML
RELKLHLDQQGFTDTQLRVAWKAVKKQELGADIIAYIRSLALGEATRPLTVRVQEAVDFV
RNSNSWNAHQRKFLDRVQTQLIKETVLTRDDLNQEPFKGDGGYNRFNKLFDNQLDNVLQT
IQERLYVA
NT seq 3267 nt   +upstreamnt  +downstreamnt
gtgtccaattctaccagtaacttctacttccttcgggaagactttccagccctctatacc
ctcggcaaggaagcagaatttctcctttaccaagacccagtcgccgctttgtttaagctg
cgcttatatggggaaaagctagttgaccgactgttctctgagcaccagttggctccgctg
gtggaaaacacccaacatcggcggcttgaggaattgaaacggcagggcattcttccccga
caggtggaggatattctccacttaataaagcgtaagggaaatgtagcagcacaccagaac
acgggtaccgctgaagacgctgctctgctgctggaatctgcctaccatcttggtaagtgg
ttactggatgcctacggagagaacttgcttcctgagggcattttgccgtttacgttaccc
cagctccgggatacgcagcaggaattggctcaattagaagccgaaaaacaggcattgcaa
gcccgggtactggaattacaggcgagtctggatgctcggcccgtattatccgctcctgag
ctggctcaattacaggagaaagcacaaaaggccgcagacaacctgaacttaagtgaggcg
gaaacacgagccattatcgatgagcaacttcgtagtgttggctgggaagcagatactccc
acccttcgctataacaaaggtacccgccccgaaaaaggccgcaatctggccattgctgaa
tggcagactacttcaggaccggccgattacgctttgtttgttgggatgaccttggtgggc
gttgtggaagccaaacgtattaacaaggatgtatcagcagctctgcaacaggctaagcgg
tatgcgaaagatattaacctgactaccggcgttgaactcttaaagtcagctccatgggga
gtttaccaagccccatttctctttgctaccaacggtaggccctatcattatcaattacct
gaaaagtcaggaatttggtttttggatggaaggcagtctattaaccactcccgagcattg
aagggttggtattctccacaggcgctgattgagctgcataagcaggacattgcggctgcc
gaggaggcattaaaaaacgacagctttgattatttgcgctctgcccacggattgggccta
agagactatcaggttacggctattcagcgggtagaagcagtaatagaagcgaacgaaccc
gagcgccgagccctactagccatggcaacgggcactgggaagacgcgcacgatactcgga
ctggtttaccgcctgttgaagagtaagcgctaccgccgtattctatttctggttgaccgc
aaattgctgggtatacaagccaccgattccttcaacgaagtgaagatggaaggcaacctc
acgctgggcgaaatttacgacttgaaagagttgaaggataagctacctgaagctgaaacc
cgccttcatgtagccacagtgcaatccttagtaaagcggatttattcaccagaagcggat
accccagcacttccgatagatgcctacgactgtatcatcatcgatgaagctcaccggggc
tacacccttgaccgggaaatgtccgaaccacaaattacgtacaaggaccaattagacttc
ttaagtacttataagcttgtactggactatttcgatgccttccggataggcttaacagcc
actccggccctgcataccgtgaagatatttggctccccggtatttcgttatacctatcgc
caagcggttatcgatggttacctcatcgaccacgagccccctattctcctgaagacgaag
ctcaatcaggaaggcattgtctgggaagccggtagcactccgcaggcatacaacccggaa
acgcagaacattgaagaattagaccggctggaggatgagctcaagattgaagtagatggc
ttcaataaactggtgcttacggagagcttcaaccgaaccatagccaaaatgctggtgaag
gagttgctgcctgagggaccagaaaagacgttgatttttgcggccagcgaccagcatgcc
gatttactggtgctcattttgaaagaagaattcaagaacgccgacattgacgttgacgaa
gatgccattatcaaaattacgggcactgccgaccagccgcagcaactggttaaaaaattc
aagaacgagcaataccctaccatcgtcgtaacggtggacctgttgaccacgggtgtagat
attcctcgtatctgtaatctggtcttcatgcgccgggttcgttcccgaatcctctacgaa
cagatgttggggcgggcaacacgcttagcggatgatataggcaaggaaaccttccgtatt
tatgatgcggtgcgtctctatgaggcgttagagccggttaccacgatgaaaccggtcgtg
gttgacccaagtcagactattacagagctgattgaggaactggataagattgaacaggaa
gaagctcggcagcagcaggtagaacaaatccttgccaagctgcaacggaagcgaaataag
ctgaccccaactcagattgagaaatttgcccacggcacgaatgggcagacactaacgcag
tttatcaaccatctgcgtacgttgccttctgtagaagcagcagcattattaaagcactat
cagcctactctaggctggctttcagaggcaaaagccgcgctgaagccccttctctacagt
acgcatcaagatgtggccttagagccggaacgcggctacggtggagattccgccagccct
attcagcgcccggaagattacctacagtcctttgcagagttcgtgcagaacaatcaaaac
actattgcggcgctgaacatagtctgcaccaatcccaaagacctcacccgccccatgcta
cgtgaattgaagctgcatcttgaccagcaaggctttactgatacgcagctccgggtagca
tggaaagccgtgaaaaaacaggaattgggagccgacatcattgcctatattcgtagccta
gcccttggtgaagcaacgcgcccactgactgtacgggtgcaggaagcggtggattttgtc
cggaattctaatagctggaatgcccaccaacggaaatttctcgaccgggtacaaacccag
cttatcaaggaaacagtgctaacccgggacgacctcaaccaagagcccttcaaaggcgat
gggggctataaccgcttcaacaaactcttcgacaaccaactggacaacgtgctgcaaact
atacaggaacgcttgtacgtcgcctaa

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