Hymenobacter sp. DG25B: PK28_09210
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Entry
PK28_09210 CDS
T03500
Name
(GenBank) hydroxymyristoyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00061
Fatty acid biosynthesis
hyd00540
Lipopolysaccharide biosynthesis
hyd01100
Metabolic pathways
hyd01212
Fatty acid metabolism
Module
hyd_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PK28_09210
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PK28_09210
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hyd01005
]
PK28_09210
01004 Lipid biosynthesis proteins [BR:
hyd01004
]
PK28_09210
Enzymes [BR:
hyd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PK28_09210
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
PK28_09210
Lipopolysaccharide biosynthesis proteins [BR:
hyd01005
]
Lipid A
PK28_09210
Lipid biosynthesis proteins [BR:
hyd01004
]
Fatty acid synthase
Component type
PK28_09210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
MaoC_dehydratas
Motif
Other DBs
NCBI-ProteinID:
AIZ63827
UniProt:
A0A0A7LQG9
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Position
complement(2170339..2171733)
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AA seq
464 aa
AA seq
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MNDKQHTIKAPVTVSGIGLHTGVVATMTFCPAPINHGYKFQRIDLPGQPIVDADVDNVVD
LSRGTTIEQNGARVNTVEHTLAALVGLQIDNVLIQLDGPEPPIMDGSSYEFIKPLQEVGL
EEQNALRNYFEIPDEIRFVDNARAVEIAGLPLNNYRVTVMVDYNSPVLGSQHASLTDISQ
FASEIASSRTFCFLHELEALYKQNLIKGGDLSNAIVVVDRVVSEDELSDLATMLGKPKVA
VKKEGILNNVDLRHKNEPARHKLLDLIGDLALVGRPLKGQILAARPGHAANVAFAKKIKK
KMQEADSSPVPSYDPSRQPVMDINKIAATLPHRYPFLLIDKIIHLDASTVTSVKNVTMNE
PFFQGHFPGNPVMPGVLQIEAMAQTGGILVLHTVPDPENYWTYFLGIENCRFRKKVLPGD
TILFKCELLAPIKRGIAKMKGQAFVNGKVVMEAEMSAAIVRKDA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataagcaacacaccatcaaagctcctgttacggtaagcggcattggcctgcac
accggcgtagtagctaccatgaccttttgcccggcccccatcaatcacgggtacaagttt
cagcgaattgatttgcccggccagcccattgtggacgccgacgtagataacgtggtagac
ctttcccggggcactactattgagcagaacggtgcccgcgtaaataccgtggagcacacg
ctggccgcgttggtaggtttgcagattgataacgtgctgattcagctggacggccccgag
ccgcctattatggatggttccagctacgagttcattaagcccctgcaggaagtaggcctg
gaagagcagaatgccctacgcaactacttcgagattcccgacgaaattcggtttgtggac
aatgcccgcgccgtagaaattgccggcctgcccctgaacaattaccgcgttacggtaatg
gtagactacaattcgccggttctgggctcgcaacacgcctccctgacggacatttcccag
tttgccagcgaaattgcttcctcccgcaccttctgctttctgcacgagctggaagccctc
tacaagcaaaacctcatcaaaggcggcgacctcagcaatgccattgtggtagtagaccgg
gtagtgagcgaagatgagctgagcgacctggctaccatgctgggcaagcccaaagtggcc
gtgaaaaaggaaggcattctgaacaatgtggacctgcgccacaaaaatgagcccgcccgc
cacaagctcctcgacctgattggggacctggccctggtaggccgcccgctgaaaggccag
atcctggctgcccgccccgggcacgcggccaacgtagccttcgctaagaagatcaagaag
aaaatgcaggaggccgattcctcaccggtacccagctacgacccctcgcggcagccggtg
atggacatcaacaagattgccgctaccctgcctcaccgctaccccttcctgctcatcgac
aagattattcacctggatgcctccacggttaccagcgtgaaaaacgtgacgatgaacgag
cctttcttccagggccacttccccggcaaccccgtcatgcccggcgtactgcagattgag
gctatggcccagaccggcggcatcctggtgctgcacaccgtgcctgaccctgagaactac
tggacttatttcctgggcatcgaaaactgccgcttccgcaaaaaagtattgcccggcgat
actatccttttcaagtgtgagctgttagctcccatcaagcgcggcattgccaaaatgaaa
ggccaagcctttgtgaatggtaaagtggtgatggaggctgaaatgagtgctgccatcgtc
cgcaaagacgcttaa
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