Hymenobacter sp. DG25B: PK28_09845
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Entry
PK28_09845 CDS
T03500
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyd03032
]
PK28_09845
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_09845
Enzymes [BR:
hyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PK28_09845
DNA replication proteins [BR:
hyd03032
]
Prokaryotic type
DNA Topoisomerases
PK28_09845
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PK28_09845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Docking
Motif
Other DBs
NCBI-ProteinID:
AIZ65150
UniProt:
A0A0A7LPD0
LinkDB
All DBs
Position
2318749..2319840
Genome browser
AA seq
363 aa
AA seq
DB search
MKIKKKHLLAEEEAHVLYKNPARQAELAGLRYYNDTHPGLTRRTTRAGNFTYHDARGQKI
TDEKTLARINGFVIPQAWTDIWIAPTATAHLQVTGRDAKGRKQYIYHPAWDHARSFTKFS
RLQAFGEKLADLRQQLHKDLARPQLDKRKVIALVLSLMDQSFIRIGSREYARKNKSYGLT
TLRDRHVQVAGADVRFKFVGKKGVAHDVLIQDRKLARLVQKCKEIPGQHLFQYYDKEGNH
VEIESGDVNDYLREVTGLSLSAKDFRTWGGTVKMVECLETVINEHPEFPKPKSLKHAVKE
VAQNLGNTPTVCSKYYIHPQVIDLFNSDKLLDYLRRHDADPAENDLLTPTEHMVLHMLRE
MVN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
ctgaaaatcaaaaaaaagcatcttctggccgaggaagaggcccatgtactctataaaaac
ccggcccggcaggcagaattggccgggctgcgctattacaacgatacgcaccccggcctt
acccgccgcaccacgcgcgccggtaatttcacttaccatgatgccaggggccagaagatt
acggatgagaagacgctggcccgcatcaacggctttgtaattccccaggcctggacggat
atctggattgcgcccaccgccacggcccacctgcaggtaaccgggcgcgatgccaagggc
cggaaacagtacatttaccatccggcctgggaccatgcgcgcagctttaccaagttcagc
cgcttgcaggccttcggcgaaaagctggccgacctgcgccagcagctacacaaagacctg
gcccgcccgcagctggacaagcgcaaggttattgccctggtgctgtcgctcatggatcag
tccttcatccggattggcagccgcgagtatgcccgcaaaaacaaaagctacggcctcacc
accctccgcgaccggcacgtgcaggtggcgggcgccgatgtgcgctttaaatttgtaggt
aagaaaggcgtagcccacgatgtcctgattcaggaccgaaagctggcccgcctggtgcag
aagtgcaaggaaattcccggccaacacctgtttcagtactatgataaggaaggcaaccac
gtggaaatagaatccggcgacgtgaacgactacctacgcgaagtaaccggcctgagcctc
tccgccaaggacttccgcacctggggcggtaccgttaaaatggtggaatgcctggaaacg
gtaataaacgaacacccggagtttcccaagcccaaatccttaaaacacgccgtaaaggaa
gtagcccaaaacctgggcaatacgcccaccgtgtgctctaaatactatatccatccgcag
gtgatagacctgtttaactccgataagctcctggattacctgcgccgccacgatgccgac
cccgcggaaaacgacctactcacgcccaccgagcacatggtgctgcacatgctgcgggag
atggtgaattag
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