Hymenobacter sp. DG25B: PK28_10195
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Entry
PK28_10195 CDS
T03500
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyd03032
]
PK28_10195
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_10195
Enzymes [BR:
hyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PK28_10195
DNA replication proteins [BR:
hyd03032
]
Prokaryotic type
DNA Topoisomerases
PK28_10195
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PK28_10195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIZ63965
LinkDB
All DBs
Position
complement(2396634..2399195)
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AA seq
853 aa
AA seq
DB search
MAEAEGEKIIPINIEDEMRGAYIDYSMSVIISRALPDVRDGLKPVHRRVLYGMSELGVSY
NKSYKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQDWSLRYPLVDGQGNFGSVDGDSPAA
MRYTEARLKRLADELLSDLDKETVDFQPNFDDSLEEPSVFPAKFPNLLVNGTSGIAVGMA
TNMAPHNLTEVVSGIIAYLDNTEITIAELMEHIVAPDFPTGGTIYGYEGVRQAFETGRGR
VVVRAKASVEVQPSGREQIVITEIPYMVNKASMIEKTAALINEKKIEGISDLRDESDRDG
MRIVYELKRDAMPNVVLNNLYKYTQLQSSFGVNNVALVKGRPLTLNLKDLIVYFVEHRAE
VVIRRTRYELAEAQKRAHILEGLLIALDHLDEVIALIRGSRDPEVARGELIERFKLSEVQ
ARAILDMRLQRLTGLERDKIVKEYDELMRLIDHLNAVLASDEMQRQIIKDELIDIRERYG
DARRTTIEYAGGDFSMEDMIADESMVITISREGYIKRTALDEYRAQGRGGVGARGAASKN
DDFTEHLFVATTHEYLLFFTELGRVFWLKVYEVPEGGKNTKGRPIQNLIEIPREDSVRSV
LNVRGLRDPDYLENTFLMFCTEQGTVKKTPLEAYSRPRTAGINAISINEGDRLLDVQLTT
GNSEVIVALNTGRAVRFHEGKVRSMGRNAAGVRGITLVGPEDRVVGMVCISDPTQELLVV
SENGYGKRSELEEYRITNRGGKGVRAMKITDKTGALVAIKAVNDSDDLMIINRSGITIRL
RVADLRTIGRATQGVRLLKISDGDAISSVAKVEAEDKVEEALEEAATVEAGGTDSGAESD
LGTLTDPDALSSN
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagaaggcgagaaaatcatcccaattaacattgaagatgaaatgcgcggc
gcctacatcgactactcgatgtcggttattatctcccgggctctacccgatgtgcgcgac
ggcctgaaacctgtgcatcggcgcgtgctctacggcatgagcgagctgggcgtctcctac
aacaaatcctataagaaaagtgcccgtatcgtgggtgaagtgctgggtaagtaccacccg
cacggcgactcctccgtgtacgataccatggtgcgcatggcccaagactggagcctgcgc
tacccgctggtagacggccagggtaactttggctccgtagacggcgactcgccggcggcc
atgcgttacaccgaagcccgcctgaagcgtttggccgatgagctgctcagcgacctggac
aaagaaacggttgactttcagcccaactttgacgactccctggaggagccttccgtattc
ccggccaagttccccaacctgctggtaaacggcacctccggcattgccgtgggtatggcc
accaacatggcgccgcacaacctcacggaggtagtgagcggcatcattgcctacctggat
aacaccgaaattaccattgccgagctgatggagcacattgtggctcccgacttccctacg
ggtggtaccatctatggctacgaaggcgtacggcaggcattcgaaaccggccgcggccgc
gtggtagtgcgggctaaagccagcgtagaggtgcagccctccggccgggagcaaatcgtg
ataaccgaaattccctacatggtgaataaggcgtccatgattgagaaaacggcggcgctc
atcaacgaaaagaaaattgaaggcatttccgacctgcgcgacgagtctgaccgcgacggt
atgcgcattgtgtatgagctgaagcgggacgccatgcccaacgtggtgctcaacaacttg
tataagtacacgcagctgcagtcttcctttggggtaaacaacgtagcgctggtgaaaggc
cggccgctcacgctcaacctgaaggaccttattgtatacttcgtagagcaccgcgccgag
gtggttattcgccgtacacgctatgagctggccgaagcccaaaagcgcgcccacatcctg
gaaggtctgctgattgcgcttgaccacctggacgaggtaattgccctgattcgcggctcc
cgcgacccggaagtggctcggggagagttgattgaacgctttaagttaagcgaagtacag
gcccgcgctatcctggatatgcgtctgcagcgccttaccggcctggagcgcgacaaaatt
gtgaaggagtatgatgagctgatgcggctgattgaccacctgaatgctgtgctggcgtcg
gatgagatgcagcgccagatcatcaaggacgagttgattgatatccgggagcggtacggg
gatgcccgccgcaccaccattgagtacgccggtggcgacttctcgatggaggatatgatt
gccgatgagagcatggtaattaccatctcccgcgaaggttatattaagcgcacggcgctg
gacgagtaccgggcacaaggtcggggaggggttggcgcccgcggggctgcttccaagaac
gacgacttcaccgagcacctgttcgtggctaccacccatgaatacctcctgttctttacc
gaactgggccgcgtattctggctgaaagtatacgaagtaccagaaggagggaagaacacc
aaaggccgtccgattcagaacctgattgagattccgcgcgaagactctgtccgctcggta
ttgaacgtgcgcggcctgcgcgacccggactacctggaaaataccttcctgatgttctgc
accgagcagggcaccgtgaagaaaaccccgctggaagcttactcgcgccctcgcaccgcc
ggtatcaacgccatttccattaacgagggtgaccgactgctggacgtgcagcttaccacg
ggcaacagcgaagttattgtcgccctgaatacgggccgcgcggttcgtttccacgaaggc
aaagtacgctccatgggccgcaatgcggccggtgtgcgcggtatcacgctggtgggcccc
gaagaccgggtagtgggcatggtctgcatatcggaccccacgcaggagctgctggtagtt
tcagaaaatggctacggcaagcgcagcgagctggaagagtaccgcatcaccaaccgtggt
ggtaaaggggttcgggccatgaaaatcacggataagacgggtgcgctggttgccattaag
gcagtgaacgactccgatgatctgatgattatcaaccgttccggcattaccattcgtctg
cgggtggcagatcttcgtaccattggccgggccacgcaaggcgttcggctgctgaagatt
tcggatggcgacgccatttcgtcggtggctaaagtagaagctgaagacaaagtagaggag
gccctggaggaagctgccaccgtggaggcgggcggcaccgattcaggagccgaatctgac
ctgggtacgctcactgatcctgatgcgcttagctccaactaa
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