Hymenobacter sp. DG25B: PK28_10595
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Entry
PK28_10595 CDS
T03500
Name
(GenBank) DNA-binding protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyd03009
]
PK28_10595
03012 Translation factors [BR:
hyd03012
]
PK28_10595
Enzymes [BR:
hyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PK28_10595
5.6.2.5 RNA 5'-3' helicase
PK28_10595
Ribosome biogenesis [BR:
hyd03009
]
Eukaryotic type
Other ribosome biogenesis factors
PK28_10595
Translation factors [BR:
hyd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PK28_10595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
DEAD
AAA_16
nSTAND3
Helicase_RecD
SMUBP-2_HCS1_1B
AAA_22
ResIII
HEM4
PhoH
T2SSE
AAA_25
Flavi_DEAD
NPHP3_N
AAA
AAA_24
DAP3
Zot
Fasciclin
UvrD_C_2
AAA_5
ATPase
cobW
TsaE
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
AIZ64031
UniProt:
A0A0A7LKZ6
LinkDB
All DBs
Position
2481749..2483731
Genome browser
AA seq
660 aa
AA seq
DB search
MTEQPTYTDPYALEKELRKVQALMQLEQKEDLEQFKIKSAQSTIAERQRRGLTWYPVNIT
KEDIGFGGKLVLELERPAGQGGLHLFQVGKNAALFGNVPGRSGSDRPTLSGVITAVKRNK
ILLATNKEDLPDWVDEGKLGVDLTFDEVSYREMEYALGKVMGAYDSRLAELRDILLGAKP
ARYKSETEAQLYYPSPLNESQLAAVRHVLAAQDVAIIHGPPGTGKTTTLVQAILETIRRE
RRVLVCAPSNTAVDLLTEKLAERGVNVIRMGNPSRVSDLLLQHTLDAQIMAHKSYPELKS
MRQTAEQYREAAGKFKRHFGWEEREQRRLLKEQAHQMLQESDQLERYITEDLLEQVQVIT
CTLVGAGNRAIRHLTYETVFIDEAAQALEPGCWIPITKANRVVLAGDHQQLPPTVKSEKA
ASEGLRETLFEKCIKRQPHTARMLQVQYRMHEQIMAFSSEQFYHGKLIAAPTVAHADLPD
YDIRFAPDTAVEFLDTAGFGFQELGLDESRSIANPEEADLLLKRLAQLLEPYDQADHTED
LLTIGVIAPYRAQINYLKDAVEENDELTGLMEHRMLSIGTVDSFQGQERDIIAISLTRSN
PQGEIGFLSDVRRMNVGMTRARRKLLIVGDSSTLGSHPFYKAFLDYTEKIGAYRTAWEMQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaacaacctacgtataccgacccctacgcgctggaaaaagagctgcgcaaggtg
caggccctcatgcagctggagcaaaaagaggacctggagcaattcaagattaaaagcgcc
cagtctaccattgcggagcgtcagcggcgcggcctcacctggtaccccgtaaatattacc
aaggaagatattggcttcgggggcaagctggtgctggagttggagcgccccgccggccag
ggcgggctgcacctgtttcaggtgggcaaaaatgccgcgctgttcggcaacgtgcccggc
cgctccggctccgaccgccccacgctcagcggcgttatcacggccgtgaagcgcaataaa
atcctgctggccaccaacaaggaagacctccccgactgggtagatgaaggcaagctgggc
gtagacctcacctttgatgaggtgagctaccgcgagatggaatacgccctgggcaaggtg
atgggcgcctacgacagccgcctggcggagctgcgcgacattctgctgggggctaaaccc
gcccgctacaaatcagaaaccgaagcccagctctactaccctagtcctttaaatgagtcg
cagctggcggccgtgcgccacgtgctggcggcccaggatgtagccattattcacggcccg
cccggcaccggcaaaactaccacgctggtgcaggccattctggaaaccatccggcgcgag
cggcgggtactggtgtgcgcccccagcaacacggccgtggatctgctcacggaaaagctg
gccgagcgcggcgtgaacgtcattcgtatgggtaacccctcgcgcgtgtctgatctgctt
ctgcagcataccctggatgcccagattatggcgcacaagagctacccggagctgaaaagc
atgcgccagacggccgagcagtaccgcgaagccgcaggcaaattcaagcgccactttggc
tgggaggagcgcgagcagcgccgcctgctgaaagagcaggcccaccaaatgctgcaggaa
tctgaccagctggagcgctacatcacggaggatttgctggagcaggtgcaggtgataacc
tgcacgctggtgggggccggcaaccgcgccattcgccacctcacctacgaaaccgttttc
attgatgaagccgcccaggccctggagcccggctgctggattcctatcaccaaagccaac
cgcgtggtgctggccggcgaccaccagcagctgccacccacggtaaaaagcgaaaaagcc
gccagtgaaggcctgcgcgaaacgctgtttgagaagtgcattaagcgccagccccacaca
gcccgcatgctgcaggtgcagtaccgcatgcacgagcagattatggcgttcagctcggag
cagttctaccacggcaagctgattgccgcccccaccgtggcccacgccgacctacccgac
tacgatattcgctttgcccccgacacggccgtggagtttctggacacggccggcttcggc
tttcaggagttgggcctggatgaaagccgttccattgccaaccccgaggaagccgacctg
ctgctcaagcgcctggcccaattgctggaaccctacgaccaggccgaccacaccgaagac
ctactcaccatcggcgtaattgccccctaccgcgctcagattaactatttaaaggatgcc
gtggaagaaaacgacgagctaaccggccttatggagcaccgcatgctcagcattggcacg
gtggactcgttccagggccaggagcgcgacatcattgccatcagcctcacgcgcagcaac
ccgcagggcgaaataggcttcctctccgatgtgcgccgcatgaacgtgggcatgacccgc
gcgcgccgcaagctgctcatcgtcggcgactcctcaacgctcggctcgcaccctttctac
aaggcttttctggattacactgaaaaaataggggcttaccgcaccgcctgggagatgcaa
taa
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