Hymenobacter sp. DG25B: PK28_11910
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Entry
PK28_11910 CDS
T03500
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00220
Arginine biosynthesis
hyd00240
Pyrimidine metabolism
hyd00250
Alanine, aspartate and glutamate metabolism
hyd01100
Metabolic pathways
hyd01110
Biosynthesis of secondary metabolites
hyd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PK28_11910
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PK28_11910
00220 Arginine biosynthesis
PK28_11910
Enzymes [BR:
hyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PK28_11910
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_3
ATP-grasp_4
DUF7626
Motif
Other DBs
NCBI-ProteinID:
AIZ64214
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All DBs
Position
2772418..2775654
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AA seq
1078 aa
AA seq
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MEKPTKVLILGSGALKIGEAGEFDYSGSQALKALKEEGIRTILINPNIATVQTSEGLADD
VYFLPVTPYFVEEVIKKEQPDGILVAFGGQTALNCAVALYRAGVFDKYNVQVLGTPVQSI
IDTEDRDIFKEKLGQIGVLSARSVAVTTLDDALAAAEKIGFPIIVRAAFALGGLGSGFAN
NFDELRALAQKAFTTSDQILVEESLKGWKEVEYEVVRDAYDNCITVCNMENFDPIGIHTG
ESIVVAPSQTLSNREYHKLRRLGIQTIRHLGIVGECNIQYALDPKSEDYRVIEVNARLSR
SSALASKATGYPLAFVAAKLSLGYSLAELKNSVTQTTSAFFEPALDYVVVKLPRWDLGKF
AGVNRQIGSAMKSVGEVMAIGKSFEEAIQKGLRMLDTGKRGFVANRAEDELDNAAIDQLL
REPNEERIFAINLAFEAGYSIQQVHELTKIDLWFLQRLYTIFQLGQKLAEGRTNGGLDGL
DTALLRDVKKAGFSDQQIAVQLLGEGDVKADELRVRARRKALGVLPVIKQIDTLAAEFPA
QTNYLYTTYHGTEHDLAPETDKSVMVLGSGVYRIGSSVEFDWCGVQAVQTAAAEGYKTII
INYNPETVSTDYDVSDRLYFEELSFERVLDILDFEQPGGVILSTGGQIPNNLATRLAEAK
APILGTSAAMIDQAENRHKFSSILDELGIAQPRWQELTSLEAMFDFVNEVGYPVLIRPSY
VLSGAAMNVVSNAFELEEFLKAAKEVSAEYPVVVSEFIQEAKEIELDAVADRGEIVSYAI
SEHVEFAGVHSGDATMYYPPQRVYVGTVRKLKIIAEKIAKRFEISGPFNIQFLEKNREIR
VIECNIRASRSFPFVSKVSGHNLIQKATQVLLGKKVTRDASELVYDLPFVGVKAPQFSFT
RLPGADPVLRVDMTSTGEVGCLGDTAEEALLKAMLSVGYKIPQKTVLLSSGPLLSKVALL
DSARLLVQHGFALYATAGTHRFLAEHQVPSTLVFWPDERQEPNVLTYLKEKKIDLVLNIP
KNLSKGELDNDYTIRRTAVDFGIPLLTNARLAKAFIQAFCTLEMKDLKIKSWNEYKAM
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacccacgaaagttcttatcctcggttccggcgcgctgaaaatcggcgaggcc
ggcgagttcgactactccggctcccaggcgctcaaggccctgaaagaggaaggcatccgc
accatcctgatcaaccccaacattgccaccgtgcagacctccgagggcctggccgacgac
gtgtactttctgcccgtgacgccctacttcgtggaggaagtcatcaaaaaggagcagccc
gacggcattctggtggccttcggcgggcagacggccctgaactgcgccgtggccctgtac
cgcgccggcgtgttcgacaagtataacgtgcaggtgctgggcacgcccgtgcagagcatc
atcgacacggaggaccgggatatcttcaaggagaagctcgggcagattggtgtgctctcg
gcccgcagcgtggccgtcaccacgctggacgacgcgctggccgccgccgaaaaaatcggc
tttcccatcatcgtgcgggccgcctttgcgctgggcgggctgggcagcggctttgccaac
aacttcgacgagctgcgggccctggcccagaaggccttcaccacctcggaccagattctg
gtggaggagtcgctgaagggctggaaggaagtggagtacgaagtggtgcgcgatgcctac
gacaactgcatcacggtctgcaacatggagaacttcgaccccatcggcatccacaccggg
gagagcatcgtagtagcgccgtcgcagacgctgagcaaccgggagtaccacaagctgcgc
cgcctcggcattcagaccatccgccacctgggcatcgtgggcgagtgcaacattcagtat
gcgctggacccgaaatccgaggactaccgcgtcattgaagtgaatgcgcgcctctcgcgc
tcctcggccctggcctccaaggccacgggctaccccttggccttcgtggccgccaagctg
agtctgggctactcactggccgagctgaaaaacagcgtgacgcagaccacctcggccttc
tttgagccggccctggactacgtggtggtcaagctgccgcgctgggatctgggcaagttc
gcgggcgtgaaccggcagatcggctcggccatgaagagcgtgggcgaggtgatggccatc
ggcaaaagctttgaggaagccattcagaagggcctgcgcatgctcgacacgggcaagcgc
ggctttgtggccaaccgggccgaggacgagctggataacgccgccatcgaccagctgctg
cgcgagcccaacgaggagcgcatcttcgctatcaatctggcctttgaggccggctacagc
atccagcaggtccatgagctgaccaaaatcgacttgtggtttctgcagcgcttatatacc
attttccagttaggccaaaagcttgccgaaggccgtaccaacggcggcctcgacgggctg
gacaccgcgctattgcgcgacgtcaaaaaagctggcttttccgaccagcagattgccgtg
cagctgctgggggaaggcgacgtgaaggccgacgagctgcgggtacgcgcccgccgcaaa
gccctgggcgtgctgcccgtcatcaagcagattgacacgctggcggccgagttcccggcc
cagaccaactacctctacaccacctaccacggcacggaacatgatttagcgccggaaact
gataagtccgtcatggtgctgggctcgggcgtgtaccgcatcggctcctccgtggagttt
gactggtgcggcgtgcaggccgtgcagacggccgcggccgagggttacaagacgattatc
atcaactacaaccccgaaaccgtctccaccgactacgacgtctcggaccggctctacttc
gaggagctgagcttcgagcgggtgctggacattctggactttgaacagccgggcggggtg
attctctccacgggcgggcagattcccaacaacctggccacccgcctggccgaggccaag
gcgcccatcctgggcacctcggcggccatgattgaccaggcggaaaaccgccacaagttc
tcctctatcctcgatgagctgggcattgcccagccccgctggcaggagctcacctcgctg
gaagccatgttcgacttcgtaaatgaggtgggctaccccgtgctgatccggcccagctac
gtgctgtcgggggcggccatgaacgtggtgtccaatgccttcgagctggaagaattcctc
aaagctgcgaaggaagtcagtgccgaatacccggtggtggtctccgagttcatccaggag
gccaaggaaattgagctggacgccgtggccgaccggggcgaaatcgtgagctacgccatt
tccgagcacgtggagtttgccggcgtgcactccggcgacgcgaccatgtactacccgccc
cagcgcgtgtacgtgggcacggtgcgcaagctcaagatcattgccgagaagattgccaag
cgctttgaaatcagcgggcccttcaacatccagtttctggagaaaaaccgcgaaatccgg
gtgattgagtgcaacatccgcgcctcccgctccttccccttcgtgagcaaggtctcgggc
cacaacctgatccagaaggccacccaggtactgctggggaagaaagtgacgcgcgacgcc
agcgagctggtctacgatctgcccttcgtgggggtaaaggccccgcagttctccttcacc
cgcctgcccggcgccgacccggtgctgcgcgtggacatgacctccaccggcgaggtgggc
tgcctgggcgacacggccgaggaagcgctgctcaaggccatgctctcggtgggctataag
attccgcagaaaacggtgctgctctccagcggcccgctgctctcgaaggtggcgctgctg
gactcggcccgcctgctggtgcagcacggcttcgcgctctacgccacagcgggcacgcac
cgcttcctggccgagcaccaggtgcccagcacgctggtcttctggcccgacgagcggcag
gagcccaacgtgctgacgtatctgaaggagaagaagattgacctggtgctcaacatcccc
aagaacctgagcaagggtgagctggacaacgactacaccatccgccgcacggccgtggac
ttcggcattccgctgctgaccaacgcgcggctggccaaagccttcattcaggccttctgc
acgctggagatgaaggatctgaagatcaagagctggaacgagtataaggctatgtaa
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