Hymenobacter sp. DG25B: PK28_12585
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Entry
PK28_12585 CDS
T03500
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00300
Lysine biosynthesis
hyd00470
D-Amino acid metabolism
hyd01100
Metabolic pathways
hyd01110
Biosynthesis of secondary metabolites
hyd01120
Microbial metabolism in diverse environments
hyd01230
Biosynthesis of amino acids
Module
hyd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PK28_12585
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PK28_12585
Enzymes [BR:
hyd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PK28_12585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIZ64311
UniProt:
A0A0A7LLU6
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All DBs
Position
2915098..2916243
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AA seq
381 aa
AA seq
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MAFTLPAGVLDRSTPFYYYDLALLDQTLEALQRAARPRGFQVHYALKANTNGPLLAHIRE
HGLGADCVSGNEVQRALSAGFKPDHIVFAGVGKSDAEMNLALAADIWCFNAESVEELAVL
NELAGAQNRKARVALRINPNVDAYTHPHITTGLDANKFGINISDLPGVIDQFETLTNLEL
IGLHTHIGSQITNLTVFEKLSHKLNELQTWLEDRGHFLPHLNVGGGLGIDYHAPDTNPIP
EFERYFRVFEKYLVRRPNQQVHVELGRSVVAQCGSLVSKVLFVKRSQQTNFAILDAGMTE
LIRPALYGSYHAIQNLTSQGPAQPYDVVGPICESSDTFGRQVLLPETKRGDVVVIRSAGA
YGEVMSSGYNLREKVEAVYSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaccttgcccgcgggcgtcctcgaccgctccactcctttttactactacgac
ctcgcgctgctggaccagacgctggaggcgctgcagcgcgccgcccggccgcgcggcttt
caggtgcactacgccctgaaagccaacaccaacggcccactgctggcccacatccgggag
cacggcctgggcgccgactgcgtgagcggcaacgaggtgcagcgcgccctctccgccggc
ttcaagcccgaccacattgtatttgccggcgtgggcaaatcagatgcggaaatgaacctg
gcgctggcggcggatatctggtgcttcaatgccgaatcggtggaggagctggcagtgctg
aatgaactggccggcgcgcaaaaccgcaaggcccgcgtggccctgcgcatcaaccccaat
gtggatgcctacacgcacccgcacattaccaccgggctggatgccaacaagttcggcatc
aatatctctgatttacccggcgtaatcgaccagtttgaaactctgacgaacctggagctg
attggcctgcacacccacatcggctcccagattaccaacctcacggtgttcgagaagctc
agccacaagctgaatgagctgcaaacctggctggaagaccggggccactttctcccccac
ctcaacgtgggcggcggcctcggcatcgattaccacgcccccgacaccaaccccattccg
gagtttgagcggtattttcgggtttttgaaaagtatctcgtgcgccgccccaaccagcag
gtgcacgtagagctgggccgctccgtagtggcgcaatgcggctcgctggtcagcaaagta
ctcttcgtgaagcgcagccagcaaaccaattttgccattctggatgcgggcatgacggag
ctgattcgcccggctttgtacggcagctaccacgctatccagaacctcaccagccagggc
ccggcccagccgtatgatgtagtgggccccatttgcgagtcgtcggatacctttggccgg
caggtgctgctgcccgagacaaagcgtggggatgttgtggttatccgctccgccggggcc
tacggcgaggtgatgtcatcgggctacaacctgcgggaaaaggtggaggcggtgtattct
ttatag
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