Hymenobacter radioresistens: PK28_13000
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Entry
PK28_13000 CDS
T03500
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hyd
Hymenobacter radioresistens
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyd03016
]
PK28_13000
Enzymes [BR:
hyd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PK28_13000
Transfer RNA biogenesis [BR:
hyd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PK28_13000
Prokaryotic type
PK28_13000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AIZ64372
LinkDB
All DBs
Position
3006678..3007613
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AA seq
311 aa
AA seq
DB search
MEFELRILGSGSATPVPNRHHTAQVLTVGNMLYLLDCGEGTQRRLLEHKISPHRLRVIFI
SHLHGDHFFGLFGLLGTMHLQGRTEPLRLFGPAGLDEVLTTQFRHSGTELGFDLEYTLVD
PTQHLLVYEDRNVTVHTMPMHHRIPCCGYLFREQPRRRSLVRELLPAGLTPAQLHQLSQG
EDVLDEANGAVLVRHAEVAGPPKHARSYAFCSDTVFTPSMAEMVHKVDILYHEATFLEDL
KERAAVTLHSTARQAGELARIAEVGQLLIGHFSSRYRDLEPLLREARTEFSNTQLALEGT
IVSVPTTAILA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggagtttgagctaagaatactaggcagtggttcggccacgccggttcccaaccgtcat
cacacggcccaggtactgaccgtgggcaacatgctgtatctgctggactgcggcgagggt
acgcagcgacggctgctggagcacaaaatcagcccccaccgcctccgggtcatctttatc
agccacctgcacggcgaccatttttttggcttgtttggtttgctgggcaccatgcacctg
cagggccgcaccgagccgttgcgcctgtttggacccgccggcctggatgaggtcctgacc
acgcagtttcgccactccggcactgagctgggctttgacctggaatacacgctggtagac
cctacccagcatctgctggtgtatgaggatcgcaacgtaacggtgcataccatgcccatg
caccaccgcattccgtgttgcggctacctgttccgggagcagccgcgccgccgctctttg
gtgcgggagctgctgcccgccggcctcacgccagcccagctgcaccagctttcccagggt
gaagacgtgctggatgaagccaacggggccgtgctggtgcgccacgccgaggtggccggc
ccgcccaaacatgcccgcagctacgccttctgctccgataccgtatttaccccttccatg
gctgagatggtgcacaaagtggatattctgtaccacgaagccacctttctggaagacctg
aaggagcgggccgccgttacgctgcactccaccgcccgccaggccggcgagctggctcgc
atagcggaggtggggcagttgctcatcgggcacttctcctctcgctaccgcgacctggag
cccctgctgcgcgaagcccgcacggagttttccaacacgcagctggccctggaaggcacc
attgtaagtgtgcccaccaccgctattctggcttaa
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