Hymenobacter sp. DG25B: PK28_13595
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Entry
PK28_13595 CDS
T03500
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PK28_13595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_13595
Enzymes [BR:
hyd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PK28_13595
DNA repair and recombination proteins [BR:
hyd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PK28_13595
Prokaryotic type
PK28_13595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIZ64447
UniProt:
A0A0A7LS26
LinkDB
All DBs
Position
complement(3159704..3160369)
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AA seq
221 aa
AA seq
DB search
MNVKIEESWRKVLASEFEKPYFQHLTAFLRGEYATATVYPPGPQIFHAFEACPFDKVEVV
ILGQDPYHGKGQAHGLAFSVAEGVRTPPSLQNVFKELQEDIPDTPPAPNGNLDRWARQGV
LLLNATLTVRAGEPGSHQKKGWEQFTDVAIQKVSELKKNVVFILWGAYAQKKGEIIDTSK
HLVLKAAHPSPYAADRGFFGSRPFSKTNEYLIAHGKKPIQW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaagatagaagaaagctggcgtaaggtactcgcctctgagttcgaaaaacca
tattttcagcacctcacagcttttcttcggggggagtatgccacggctaccgtgtacccg
cccggcccgcagatttttcatgcctttgaggcctgccctttcgataaagtggaggtagtg
attctggggcaggacccgtaccacggcaaaggacaggcccacgggctggctttctccgta
gccgagggcgtgcgcacgccgccttctctgcaaaacgtttttaaggagctgcaggaagac
attccggacacgccccccgcccccaacggcaacctcgaccggtgggcccggcagggcgtg
ctcctgctcaatgccacgcttacggtacgcgccggagagcccggctcccaccaaaagaaa
ggctgggaacagttcactgatgtggctattcagaaagtatcggagctgaagaaaaacgtg
gtatttattctgtggggcgcctatgcgcagaaaaaaggagaaatcattgataccagcaag
cacctggtgctgaaagccgcccacccgtctccctacgccgccgaccggggcttcttcggt
tcccggcccttcagcaaaaccaacgaatacctcatagcccacggtaaaaagccgattcag
tggtag
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