Hymenobacter sp. DG25B: PK28_15025
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Entry
PK28_15025 CDS
T03500
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PK28_15025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_15025
Enzymes [BR:
hyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PK28_15025
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PK28_15025
RecFOR pathway proteins
PK28_15025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
AAA_22
Mg_chelatase
nSTAND3
NB-ARC
AAA_14
AAA_PrkA
Rad17
AAA_33
RNA_helicase
NTPase_1
AAA_18
TsaE
NPHP3_N
DUF815
Bac_DnaA
bpMoxR
AAA_24
ABC_tran
NACHT
Sigma54_activ_2
Torsin
Motif
Other DBs
NCBI-ProteinID:
AIZ64654
UniProt:
A0A0A7LN44
LinkDB
All DBs
Position
complement(3500662..3501708)
Genome browser
AA seq
348 aa
AA seq
DB search
MRESYLTGGADNMDATEKDIDKALRPLSFADFAGQDKVVENLKVFVGAAKQRGEALDHVL
LHGPPGLGKTTLSHIISNELGSGIKMTSGPVLDKPSDLAGLLTNLEPHDVLFIDEIHRLN
PVVEEYLYSAMEDYRIDIMLDSGPNARSVQISLSPFTLIGATTRSGLLTSPLRARFGINS
RLEYYDAKLLTSIVQRSAEILNTPIHEDAAYEIARRSRGTPRIANNLLRRTRDFAQMKGD
GTITQAIAHFALGALDVDARGLDDMDKRILLTIIDKFKGGPVGLSTIATACGDEAETIEE
VYEPFLIQEGYIKRTPRGREATEAAYQHLGRTMPQHLRGNTATGELFS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatcttatctgaccggtggcgccgacaatatggacgccaccgaaaaagacatt
gataaagccctgcggcccttaagctttgctgactttgcgggccaggataaagtggtggaa
aacctgaaggtattcgtgggcgcagctaagcagcgcggtgaggccctcgaccacgtgctg
ctgcacggccctcccggcctgggcaaaaccaccctctcgcacattatctccaacgagctg
ggctccggcattaaaatgaccagcggccccgtgctggacaagccctccgacctggccggc
ctgctcaccaacctggagccgcacgatgtgctgttcatcgacgaaattcaccgcctgaac
cccgtggtggaagagtacctgtactcggctatggaggactaccgcatcgacatcatgctc
gattcgggcccgaatgcgcgctccgtgcagatttcgttgtcaccgttcacgctcatcggg
gctaccacccgttccggtctgcttacctcgccgctgcgggcgcgctttggtatcaactcc
cgcctggagtactacgatgccaaactgctcaccagcattgtgcagcgctccgccgaaatc
ctgaatacgcccattcatgaggatgcggcctacgaaattgcgcgccgctcgcgcggtacg
ccgcgtattgccaacaacctgctgcgccgtacccgcgacttcgcccagatgaaaggcgac
ggcaccatcacgcaggccattgcccacttcgccctcggcgcgctggacgtagacgcccgc
ggcctcgatgatatggacaagcgtatcctgctcaccatcatcgacaagttcaagggtggc
cccgtgggcctgagcaccattgccaccgcctgcggcgacgaagccgaaaccattgaggaa
gtgtacgagccattcctcatccaggaaggctacatcaagcgcaccccccgcggccgcgaa
gccactgaggccgcttaccaacacctgggccgcaccatgccgcagcatttgcgtgggaat
acggccacgggggagttgtttagttag
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