Hymenobacter sp. DG25B: PK28_15460
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Entry
PK28_15460 CDS
T03500
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
hyd
Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyd02000
]
PK28_15460
Transporters [BR:
hyd02000
]
Other transporters
Pores ion channels [TC:
1
]
PK28_15460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARDB
NPCBM_assoc
DUF4832
Por_Secre_tail
CUB
Motif
Other DBs
NCBI-ProteinID:
AIZ64717
UniProt:
A0A0A7LSU0
LinkDB
All DBs
Position
complement(3598637..3602671)
Genome browser
AA seq
1344 aa
AA seq
DB search
MKHNYSSARRQYGWWIMFCWLLAAGMLMSQGAQAQTYSMPVSGTSSITACEGTLYDDGGP
NNSPSANSNGVLTINPGVAGNKIKLDFTTIQLYYEQISIYDGTSTGAPLIAEFTSGSGTG
TVYATNNTGALTVKFTSNYYNYYGYQGFAATISCVTSVPLADLAIQGASAQPLSIVAGNN
MYVTSSIYNLGGTTASSSNVGYYLSTNNTLDGSDVLLATSTGGYLAAKGSSYRDQNLTIP
QTTSSGTYYLLFVADNQNGVAESDEQNNVVSLSFSVVPPSVDLSINSTSLSPTSVMAGNY
VSINGYVSNQGNATVKSVTVGFYLSKDAVLDGSDKLLTNSNLGTIDASGYAYFYPSATIP
SGTTPGSYYVLVVADYQNQVTETNEQNNLSALALTVEAPTIDLTMLQAGLGVNKTTAGSQ
ISASSYIYNQGNSTASSSNAAYYLSTDSKLDGQDVLLASSTGGQLGAQQYDSRSTTLTIP
SGTKAGTYYVLFVADYQNTVAESNEQNNVSAVSLAVEDPYVDLQAYSVTTSSYSVVTGGK
LDLYGYIYNQGNMTSAATSVGFYLSKNATYDGTDVLLSNNTLASITGTNSYYNYGSVSST
VTIPTGTAVGTYYLLMVADNKNSITESNEQNNVTYTSISVVQPSVDLYISDASLSRYSVA
AGSNFTTGFYVINQGNTSASTSNAQVYLSSNTTFDGNDVLLVTSTGGALGGGSYSYRNTS
ATVPTTTTPGTYYVLFVADATNQVSETNEQNNTYGAIQITVTAPFKGVIVPASGTNTLTT
CNADIYDNGGTENYASYSDGALVIKPGTTGAKVQLTFSQLSLEVYSNLYIYDGTSTNAPL
LATYYYYQNSNNTVQATNSEGALTLVFSSGYYTSGGFQAKATCILPADLTVSGVSLQTSS
TTPGSTLTASATITNSGQGNATYSNVGYYLSSDQTFSVSDVPLATVSGGTLNAGSSATRG
GTLSVPAGTSYGTYYVLCVADPDKQEPESNENNNVAVTTLKVGDAEPNLTLASATLQAGS
VLSGGTLTSSVVVKNDGSASAASSTLGYYLSANATWESSDVLLQTATGASLAASGTATRT
ATLTIPATTTAGSYYVLFVADPSAAVTESNETDNVASVALTVNSATVSKPDLAFVAASGS
VSPASIVAGKSLTASATVTNLGTTSATSVPLTMYLSADNKLDAADVKLGAATDASLTNGL
TRVQQITAAIPTTTKAGSYYVLLMLDAETTLSETSRANNLYSLPLTVSVGTAQREQTAGL
TISVYPNPTHSAPISVHMDGVSTTKGAATLTLYNSLGQRVAQQVVRRPGSGAKAEFDTRT
LAQGVYMLHITGEQLHVVRRVVVD
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacaattactctagtgcccgccggcagtatggctggtggattatgttttgctgg
ctgctggcagcgggtatgctcatgagccagggcgctcaggcccagacctactccatgccg
gtttcgggtaccagctctattacggcctgtgagggaacactctatgatgatggtggccct
aataacagccccagcgccaactccaacggagtgctgacgattaaccccggcgtagcgggc
aataagattaagctggattttaccaccattcagctgtactacgagcaaatatccatatac
gacggcacctctaccggggcgccgcttattgcggagttcaccagcggctcaggcaccggc
actgtgtatgctaccaacaacacgggggcgctgacggtaaagttcacctccaactattac
aattattatggctaccagggcttcgcggctactatcagctgcgtcacctcggttccgctt
gcagatctggccattcagggggcctcggctcagccgctttccattgtggcgggcaataac
atgtacgttacctcgtccatctataacctgggcggcaccacggccagctccagcaacgta
ggctactacctgtctaccaacaatacgctggatggctccgatgtgctactggctacttct
accggtggctacctggccgcgaaaggctccagctaccgcgaccagaacctgaccattccg
cagacgaccagcagcggcacgtattatctgctgtttgtggccgataaccagaatggagta
gccgagagtgatgagcaaaacaacgtggtgagcctttccttcagcgtggtgcccccctcc
gtggatcttagcattaactccacttcgctgtctcccacctccgttatggcgggtaactat
gtcagtataaatggctatgtatccaaccagggcaatgccacggtaaaatcggtaaccgtc
ggcttttatctctcgaaagatgcggtgctggatggcagcgacaagctgctgacgaattcc
aatctgggcaccattgacgccagtggatacgcctacttttatccttccgccactattcca
tccggcaccacgcccggtagctattacgtgctggtagtagccgactaccagaaccaggta
accgaaaccaacgagcagaacaacctctcggccctggccctgacggtggaggcacccacc
attgacctaaccatgctgcaggccggcctgggggtcaataaaaccaccgccggcagccag
atttcggcctccagctatatctacaatcagggaaacagtacggccagcagctctaacgcg
gcttattatctatctactgacagcaagctggatgggcaggatgtgttgctcgcctcctca
acgggcggccagctgggcgcccagcagtacgacagccggagcaccacgcttaccattcct
tccggcaccaaagccggtacgtattacgtgttgtttgtggcggattatcagaatacggta
gccgaatccaacgagcagaacaacgtgtcggccgtatcgttggcggtagaggatccttac
gtggatctgcaggcatattcagttaccacttcttcttattcagtagtaaccggtggcaag
ctggacctgtacggctacatctataaccagggcaatatgacctcggctgccaccagcgtg
ggcttttatctgtcgaaaaatgctacctatgatggcacggacgtactgctcagcaataac
acgctagccagcattaccggtaccaacagctactacaactatggttcggtatcttctacc
gttaccatccccacgggcactgccgtaggtacctattacctgctgatggtagcggataac
aagaacagcataaccgagtctaatgagcagaacaacgtaacctacaccagcatatcggtg
gtgcagcccagcgtagatttgtacatatcggacgctagcctatcgcgctacagcgtagcg
gccggcagcaattttacgaccggcttctatgtaataaatcagggcaacaccagcgcatca
accagcaatgcgcaggtgtacctgtcttccaataccacctttgatggtaatgacgtactg
ttggtaacctccacgggtggagcgttgggaggaggttcgtactcctaccgcaataccagc
gctacagtgcctacaactactacgccgggcacttattatgtgttgttcgtggccgatgct
accaatcaggtaagtgagaccaatgagcagaacaatacctatggtgctattcagattacc
gtaacggcaccgttcaaaggtgttattgtccctgcttcgggtaccaacaccctcactacc
tgtaacgcggatatttacgacaacggcggtacagaaaattatgcctcttactccgatggg
gccctcgtcattaagcccggcacaaccggggccaaggtacaactgacgttctcgcaactc
tcgctggaagtctactccaacctctacatctatgacggtaccagcacgaatgctccgctc
ctggctacttactactactaccagaattctaacaatacggttcaggctaccaacagtgaa
ggcgcacttaccctggtattcagcagcggctattacactagcggcggctttcaggccaaa
gccacctgtattctgcccgctgacctgacggtgtccggcgtttcgctacaaaccagcagc
actaccccgggctctaccctcacggcctcagctactatcaccaactcgggccagggtaat
gccacctacagcaatgtgggctactacctctcctcggaccagactttcagcgtgagcgac
gtaccgctggccaccgtaagtggcggcactctgaatgccggcagcagcgccacccgcggc
ggtaccctatcggttccggccggcaccagctatggcacctattatgttctgtgcgtggcc
gacccggataagcaggagccagaatcaaacgagaacaacaacgtagcggtaactaccctg
aaagtaggtgatgccgagcccaacctcacgctggcctctgctaccctgcaggcgggttcg
gtgctgagcggcggcacgctcaccagcagcgtggtagtgaagaatgatggttccgcttcg
gctgcgtccagcacgctgggctattatctgtcggctaatgccacttgggaaagcagtgat
gtgctgctgcaaaccgcaaccggcgcctcattggcggcttccggcacggccacgcgcacg
gctaccctcaccattccggctactaccaccgccggcagctactacgtgctgttcgtggcc
gatccttcggcagccgtaacggaaagcaacgaaaccgataacgtggcttccgtagcccta
acggtaaactccgctaccgtttccaagccggacctggcctttgtagccgcctcgggcagt
gtttctcccgccagcattgtagccggcaagagcctcacggccagtgctaccgtcactaac
ctgggcaccacttcggctaccagcgttccgctcaccatgtatctttccgctgataacaag
ctggatgctgctgatgtgaagctgggtgctgccaccgatgcctccctaaccaatggcctg
acgcgcgtgcagcagattaccgccgccattccgaccaccaccaaagccggcagctattat
gtgttgctgatgctggatgcggaaacaacgctttcggaaaccagccgcgccaacaacctg
tacagcctgccgctcacggtttcggtgggaacggcccaacgcgagcaaacggccggcctt
accattagcgtgtatcctaaccccacgcattctgcgcccatttcggtgcatatggatggc
gtaagcacaaccaagggtgcggccacgcttacgctgtataacagcctgggccagcgcgtg
gcgcagcaggtagtacgccgccccggtagcggtgccaaagctgagtttgatacccgtacg
ctggcacagggagtctacatgctccacattaccggcgagcagttgcacgtagtacgccgc
gtggtggtagactaa
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