Hymenobacter sp. DG25B: PK28_16250
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Entry
PK28_16250 CDS
T03500
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PK28_16250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_16250
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PK28_16250
RecFOR pathway proteins
PK28_16250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
Transposase_20
RecR_HhH
HHH_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AIZ64835
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All DBs
Position
3778264..3778869
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AA seq
201 aa
AA seq
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MIAYLDGKLAYKDPTLAIIDLNGLGYEVKISLATYSKLPAEGEKAKLYTYQHIKEDAQAL
YGFLDPNEKSLFMQLISVSGIGPGTGIVMVSSMSVGEIRQAIVQEDVRSIQSIKGVGPKT
AQRVVLELKDKFRKEELLAKAGYDTVPLARQHNTNRSEALAALVTLGFARAAAEKQLDQI
QHRHGNDLSVEELIKFALKSH
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgattgcctacctcgacggtaaactagcctataaagatcctaccctggccattatcgac
cttaacggcctgggttatgaagtaaaaatatccctggccacctattcaaagctgccggcc
gagggtgaaaaagcgaaactttacacttatcagcatattaaggaagacgcgcaggccctg
tacggcttcctggaccccaacgaaaagtcgctgtttatgcagctgatttctgtgtcgggc
attgggccgggcacgggtattgtgatggtatcttccatgtcggtgggggaaatccggcag
gctattgtgcaggaagatgtacgctctattcagagtattaaaggcgtggggcccaaaacg
gcccagcgcgtggtgctggagttgaaagataaattccggaaggaagagcttttggctaaa
gccggttatgatacggtgcctttggcccggcagcacaataccaaccgctcggaagcgtta
gcagctttggttaccctgggctttgcccgggcggcggccgagaaacaattagaccagatc
cagcaccgccatggcaacgatctgagcgtggaagaattaattaaatttgcccttaagtcc
cattag
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